Protein Alignment Vap33 and Vapa

DIOPT Version :10

• Sequence 1: NP_570087.1
• Gene: Vap33 / 31349
• FlyBaseID: FBgn0029687
• Length: 269
• Species: Drosophila melanogaster
• Sequence 2: XP_017172989.1
• Gene: Vapa / 30960
• MGIID: 1353561
• Length: 290
• Species: Mus musculus
• Alignment Length: 296
• Identity: 103/296 - (34%)
• Similarity: 150/296 - (50%)
• Gaps: 56/296 - (18%)

  Fly    10 LTIEPEHELRFVGPFTRPVVTIMTLRNNSALPLVFKIKTTAPKRYCVRPNIGKIIPFRSTQVEIC 74
            |.::|..:|:|.||||..|.|.:.|:|.|...:.||:|||||:|||||||.|.|.|.....|.:.
Mouse    15 LVLDPPSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSIVTVSVM 79

  Fly    75 LQPFVYDQQEKNKHKFMVQSVLAPMDADLSDLNKLWKDLEPEQLMDAKLKCVFEMPTAEANAENT 139
            ||||.||..||:|||||||::.||  .::||:..:||:.:|::|||:||:||||||    |..:.
Mouse    80 LQPFDYDPNEKSKHKFMVQTIFAP--PNISDMEAVWKEAKPDELMDSKLRCVFEMP----NENDK 138

  Fly   140 SGGGAVGGGTGAAGGGSAGANTSSASAEALESKPKLSSEDKFKPSNLLETSESLDLLSGE----- 199
            .|....|..:..|...|..:..::.::..|::.|:...|.|   .|.:|.|:::.|.:.:
Mouse   139 LGKTPPGIASTVASLSSVSSAVATPASYHLKNDPRELKEVK---QNDMEPSKAVPLNASKQDGPL 200

  Fly   200 -------------IKALRECN------IELRRENLHLKDQITRFR---------SSPAVK---QV 233
                         .|.:.||.      ::|..||.||:|:..|.|         |:.||.   .|
Mouse   201 PKPHSVSLNDTETRKLMEECKRLQGEMMKLSEENRHLRDEGLRLRKVAHSDKPGSTSAVSFRDNV 265

  Fly   234 NEPYAPVLAEKQIPVFYIAVAIAAAIVSLLLGKFFL 269
            ..|...:|           |.|||..:...||||.|
Mouse   266 TSPLPSLL-----------VVIAAIFIGFFLGKFIL 290

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vap33	NP_570087.1	Motile_Sperm	9..115	CDD:459882	52/104 (50%)
Vapa	XP_017172989.1	Motile_Sperm	14..118	CDD:459882	52/104 (50%)