DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vap33 and SPBC16G5.05c

DIOPT Version :9

Sequence 1:NP_570087.1 Gene:Vap33 / 31349 FlyBaseID:FBgn0029687 Length:269 Species:Drosophila melanogaster
Sequence 2:NP_001342726.1 Gene:SPBC16G5.05c / 2540009 PomBaseID:SPBC16G5.05c Length:383 Species:Schizosaccharomyces pombe


Alignment Length:336 Identity:84/336 - (25%)
Similarity:128/336 - (38%) Gaps:134/336 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LTIEPEHELRFVGPFTRPVVTIMTLRNNSALPLVFKIKTTAPKRYCVRPNIGKIIPFRSTQVEIC 74
            :::|...||.|..|||.....::::.|.:..|::||:||||||.||||||.|||.|..:..|::.
pombe     1 MSVECSGELFFYPPFTTMSKELISVHNPNPEPVIFKVKTTAPKHYCVRPNSGKIEPKSTVNVQVL 65

  Fly    75 LQPFVYDQQE-----KNKHKFMVQSVLAPMDADLSDL---NKLWKDLEPE--QLMDAKLKCVF-- 127
            ||..   ::|     |.:.||::|| :|..|||.|::   ::.|.::|.:  .:.|.|::||:  
pombe    66 LQAM---KEEPAPDFKCRDKFLIQS-MAIGDADTSNVENYHEFWTEMEKQGRSIFDRKIRCVYST 126

  Fly   128 EMP--TAEANAENTSG-------------GGAVGGGT--------------GAAGGGSAGANT-- 161
            :.|  :|:...||||.             ..:|||.|              ||....|.|.||  
pombe   127 KQPPQSADKQVENTSTSNPPVSVEGSENLASSVGGPTAVGVSLDEAQNDFNGAKDHLSNGVNTVV 191

  Fly   162 --------------------------------------------SSASAEALESK---------P 173
                                                        ||..|:...||         |
pombe   192 PDSTFRSTFESAQIPDASVVQTVVTDADNGAASVKDTIVTAESASSKGADVARSKVQDIIDNEIP 256

  Fly   174 KLSSEDKFK-------------PSNLLETSESLDLLSGEIKA-LRECNIELRRENLHLKDQITRF 224
            |.|...:..             |.||...:|..|....:..: |.|                   
pombe   257 KPSESPRRSVSSTPPVHPPPPVPQNLSAVNEEFDTKKNDFDSKLPE------------------- 302

  Fly   225 RSSPAVKQVNE 235
             |:|||::|:|
pombe   303 -STPAVEKVSE 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vap33NP_570087.1 Motile_Sperm 9..115 CDD:279029 42/112 (38%)
SPBC16G5.05cNP_001342726.1 SCS2 1..292 CDD:227398 76/294 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 69 1.000 Domainoid score I2676
eggNOG 1 0.900 - - E1_COG5066
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000705
OrthoInspector 1 1.000 - - mtm9274
orthoMCL 1 0.900 - - OOG6_101143
Panther 1 1.100 - - LDO PTHR10809
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2279
SonicParanoid 1 1.000 - - X526
TreeFam 1 0.960 - -
1110.800

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