DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vap33 and F54H5.3

DIOPT Version :9

Sequence 1:NP_570087.1 Gene:Vap33 / 31349 FlyBaseID:FBgn0029687 Length:269 Species:Drosophila melanogaster
Sequence 2:NP_495345.1 Gene:F54H5.3 / 186264 WormBaseID:WBGene00018840 Length:279 Species:Caenorhabditis elegans


Alignment Length:257 Identity:57/257 - (22%)
Similarity:110/257 - (42%) Gaps:67/257 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 IEPEHELRFV----GPFTRPV----VTI-----------------MTLRNNSALPLVFKIKTTAP 51
            :|.:..:.::    |..|:|:    :|:                 :.|:|.....:.|:::|..|
 Worm     1 METKQSMDYIIKGPGGTTKPIAPKLITVNPLNIIIESNSGQIDKTLELKNIYPCRIAFRVRTNGP 65

  Fly    52 KRYCVRPNIGKIIPFRSTQVEICLQPFVYD-QQEKNKHKFMVQSVLAPMDADLSDLNKLWKDLEP 115
            .||.|.|:.|    |.|...::.:|..:.| .:.::.|:|:||::  |...|.:|...:||  :|
 Worm    66 TRYTVCPSKG----FLSNGEKVAIQITLIDGTKYQSNHQFIVQAM--PSPGDFADRKFIWK--QP 122

  Fly   116 EQL---MDAKLKCVFEMPTAEANAENTSGGGAVGGGTGAAGGGSAGANTSSASAEALESKPKLSS 177
            ..|   .:.::|.:  .|.......|......|...|      .:|.::..||:|:|.: |.:.|
 Worm   123 NFLGIFTNTRVKTM--RPAQSLPKSNPKSPAKVSTPT------DSGMSSPVASSESLVT-PSVPS 178

  Fly   178 EDKFKPSNLLE---TSESLDLLSGEI-KALRECNIELRRENLHLKDQITRFRSSPAVKQVNE 235
            ..| .||:.::   .:|:::.||.:: ||:.|.|.                |:|..|..||:
 Worm   179 WSK-SPSSPIDHGKFAENINDLSVQVKKAIDEKNT----------------RTSEMVSVVNQ 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vap33NP_570087.1 Motile_Sperm 9..115 CDD:279029 28/128 (22%)
F54H5.3NP_495345.1 Motile_Sperm 25..122 CDD:279029 24/104 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160163154
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5066
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10809
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.800

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