DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vap33 and vpr-1

DIOPT Version :9

Sequence 1:NP_570087.1 Gene:Vap33 / 31349 FlyBaseID:FBgn0029687 Length:269 Species:Drosophila melanogaster
Sequence 2:NP_001370533.1 Gene:vpr-1 / 172259 WormBaseID:WBGene00018008 Length:245 Species:Caenorhabditis elegans


Alignment Length:266 Identity:85/266 - (31%)
Similarity:131/266 - (49%) Gaps:35/266 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LTIEPEHELRFVGPFTRPVVTIMTLRNNSALPLVFKIKTTAPKRYCVRPNIGKIIPFRSTQVEIC 74
            |.:.|..||.|.|||:..|.:.|||:|.|..|:.||:||||||:||||||.|.:....|.|:.:.
 Worm     8 LQVTPNRELVFTGPFSDVVTSHMTLKNTSTNPVCFKVKTTAPKQYCVRPNSGLLKSGDSKQITVM 72

  Fly    75 LQPFVYDQQEKNKHKFMVQSVLAPMDADLSDLNKLWKDLEPEQLMDAKLKCVFEMPTAEANAENT 139
            |||......:..:|||||||.:||.: ||.||..:||.::|.:|..:||...|......|:.::|
 Worm    73 LQPLEGIPSDAGRHKFMVQSCVAPSE-DLPDLESVWKIIDPAELTYSKLMVTFVDKRDPASGDDT 136

  Fly   140 -------SGGGAVGGGTGAAGGGSAGANTSSASAEALESKPKLSSEDKFKPSNLLETSESLDLLS 197
                   ....|..|.....|...:|..:...:..:|....|.:.::|      .|..:.:..|.
 Worm   137 KTFAVRNEDSFASSGQAQELGSSYSGTPSHDGTVNSLRKSLKSTVDEK------EELQKKVHGLE 195

  Fly   198 GEIKALRECNIELRRENLHLKDQITRFRSSPAVKQVNEPYAPVLAEKQIPVFYIAVAIAAAIVSL 262
            .||:.:.:.|.:|::.:           |..|:  |:..| |.|     .:|.|||  ||.::.|
 Worm   196 QEIEVMLKKNRKLQQSH-----------SDGAL--VDGAY-PTL-----QIFLIAV--AALLIGL 239

  Fly   263 LLGKFF 268
            ::|:.|
 Worm   240 IVGRLF 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vap33NP_570087.1 Motile_Sperm 9..115 CDD:279029 50/104 (48%)
vpr-1NP_001370533.1 Motile_Sperm 7..112 CDD:395510 50/104 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 99 1.000 Domainoid score I4452
eggNOG 1 0.900 - - E1_COG5066
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H36163
Inparanoid 1 1.050 113 1.000 Inparanoid score I3429
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1332028at2759
OrthoFinder 1 1.000 - - FOG0000705
OrthoInspector 1 1.000 - - otm14219
orthoMCL 1 0.900 - - OOG6_101143
Panther 1 1.100 - - LDO PTHR10809
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2279
SonicParanoid 1 1.000 - - X526
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.900

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