Protein Alignment CG42541 and Rem1

DIOPT Version :9

• Sequence 1: NP_996345.3
• Gene: CG42541 / 31344
• FlyBaseID: FBgn0260658
• Length: 1418
• Species: Drosophila melanogaster
• Sequence 2: NP_001020924.1
• Gene: Rem1 / 366232
• RGDID: 1306560
• Length: 297
• Species: Rattus norvegicus
• Alignment Length: 303
• Identity: 83/303 - (27%)
• Similarity: 125/303 - (41%)
• Gaps: 79/303 - (26%)

  Fly   896 VVLATQSGKPMTERQRLRT---------------SSMPAESRRPRLAEMRRSAIHAGDPDMTYYR 945
            :.|.||.....|.|:|..|               ::.||:|:.|||.:
  Rat     1 MTLNTQQEAKTTLRRRASTPLPLSSRGHQPGRLCTAPPAQSQHPRLGQ----------------- 48

  Fly   946 LRSFSITSHGICNLGDSLRSRRSRSIN-SVTSTGTSNSGVDRHNSNASGASGEVIDGDPNVPAYK 1009
                                  |.|:| .:.....:..|....:|::.| |.|.:        |:
  Rat    49 ----------------------SASLNPPIRKPSPAQDGWSSESSDSEG-SWEAL--------YR 82

  Fly  1010 IAMLGASGVGKTTLTYQFTTSDYICAYDLSLDDDYG---QKTVSVLVDNIETDLEIIDHPACEMS 1071
            :.:||..|||||:|...|....     :..|.:..|   ::|:|  ||..:|.|.::|....|..
  Rat    83 VVLLGDPGVGKTSLASLFAEKQ-----ERDLHEQLGGVYERTLS--VDGEDTTLVVMDTWEAEKL 140

  Fly  1072 TEAF----CATYNIDLFVVVYSVIDRNTFAAAERVLQYLKENEMLLSRGAILVANKTDLQRHRVV 1132
            .|::    |.... ..:|:|||:.||::|.:|..:...|:..........|||.||.||.|.|.|
  Rat   141 DESWSQESCLQAG-SAYVIVYSIADRSSFESASELRIQLRRTHQAAHVPIILVGNKADLARCREV 204

  Fly  1133 TRQMGRKVAKEIACKFIETSSGLDHNVDELLVGIVAQVKLNPQ 1175
            :.:.||..|....|||||||:.|.|||.||..|:|.|::|..|
  Rat   205 SVEEGRACAVVFDCKFIETSATLQHNVTELFEGVVRQLRLRRQ 247

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG42541	NP_996345.3	RGK	1008..>1175	CDD:206715	61/173 (35%)
		small_GTPase	1008..1171	CDD:197466	60/169 (36%)
Rem1	NP_001020924.1	RGK	81..297	CDD:206715	62/175 (35%)
		small_GTPase	81..245	CDD:197466	60/171 (35%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0395
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D301527at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	1	1.000	-	-		mtm8910
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR45775
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	6	5.920