DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42541 and W04C9.5

DIOPT Version :9

Sequence 1:NP_996345.3 Gene:CG42541 / 31344 FlyBaseID:FBgn0260658 Length:1418 Species:Drosophila melanogaster
Sequence 2:NP_490735.3 Gene:W04C9.5 / 189184 WormBaseID:WBGene00021027 Length:369 Species:Caenorhabditis elegans


Alignment Length:397 Identity:92/397 - (23%)
Similarity:158/397 - (39%) Gaps:89/397 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   835 PSPVSMIPSNQQKQQQQLLQLQLQQEQQHLPTHLPMKRERGVGESSGASTSGTAIAELASSVVLA 899
            |||.|  |:..::.               |||. |:.|.      |..||..|......::::  
 Worm    25 PSPAS--PAATRRS---------------LPTS-PISRR------SLPSTPRTVSPRRLNNLL-- 63

  Fly   900 TQSGKPMTERQRLRTSSMPAESRRPRLAEMRRSAIHAGDPDMTYYRLRSFSITSHGICNLGDSLR 964
                 |..:.....||:..:....||..:.|.       |...|    .:|:..|     .:::.
 Worm    64 -----PDVDEHFASTSTTSSSENSPRRVKKRY-------PPPRY----QYSLQMH-----QNNIE 107

  Fly   965 SRRSRSINSVTSTGTSNSGVDRHNSNASGASGE------------------VIDGDPNVPAYKIA 1011
            ....|...|:.|.|..|..|..:....:.::|:                  :.....|||...:.
 Worm   108 DVEKRPEGSLRSFGIKNGFVTDNGYKQTCSTGQPVVAHNYKDRRATCPEVWLFQETSNVPMQHVV 172

  Fly  1012 M--LGASGVGKTTL---TYQFTTSDYICAY--DLSLDDDYGQKTVSVLVDNIETDLEIIDHPACE 1069
            :  .|:...||.||   ..||.|. .:..|  :.:..||...||::.|::|.:.:||::.....|
 Worm   173 LRVYGSRNSGKKTLLSAINQFATR-LVTQYNNESNEGDDTSSKTMNFLLNNEQIELEMLLEATLE 236

  Fly  1070 MSTEAFCATYNIDLFVVVYSVIDRNTFAAAERVLQYLKENEMLLSRGA--ILVANKTDLQRHRVV 1132
            .|..|...|    ::.:||:|.:|.:|..|..:|..|...:  ::|||  ||:.||.||:|:.||
 Worm   237 NSPFASSLT----MYAIVYNVDNRESFVCATDLLSRLLNRK--IARGANIILIGNKIDLKRNTVV 295

  Fly  1133 TRQMGRKVAKEIACKFIETSSGLDHNVDELLVGIVAQVKLNPQRL--------RLLTELELQRLN 1189
            ::..|..:||...|.|:|.|:....|:.||...|:.|::.....|        |::|..:....:
 Worm   296 SKMEGACLAKVHKCNFVEVSAQYSMNISELWTIILKQLQAPKAELEEPNGWMHRIVTRGKQLAHS 360

  Fly  1190 LQSTIQK 1196
            .:..:||
 Worm   361 AEQIVQK 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42541NP_996345.3 RGK 1008..>1175 CDD:206715 53/175 (30%)
small_GTPase 1008..1171 CDD:197466 53/171 (31%)
W04C9.5NP_490735.3 P-loop_NTPase 171..333 CDD:304359 52/168 (31%)
Ras 177..333 CDD:278499 52/162 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0395
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45775
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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