DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42541 and F20D6.8

DIOPT Version :10

Sequence 1:NP_996345.3 Gene:CG42541 / 31344 FlyBaseID:FBgn0260658 Length:1418 Species:Drosophila melanogaster
Sequence 2:NP_505105.2 Gene:F20D6.8 / 184726 WormBaseID:WBGene00017637 Length:370 Species:Caenorhabditis elegans


Alignment Length:331 Identity:78/331 - (23%)
Similarity:138/331 - (41%) Gaps:47/331 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   879 SSGASTSGTAIAELASSVVLATQSGKPMTERQRLRTSSMPAESRR--------PRLAE------- 928
            :|..|:|.:......|:::|:.........|:.|.::.:|...||        |..:.       
 Worm    29 TSSVSSSNSNSVNANSTMLLSPNFSPSPCPRRSLPSTPLPNGHRRSLPPTPPTPAFSSTSEQEEL 93

  Fly   929 -MRRSAIHAGDPD--MTYYRLRSFSITSHGICNLGDSLRSRRSRSINSVTSTGTSNSGVDRHNSN 990
             :....|:..:|:  :...|||||.:....|.:.|.. :....:...||..||.      |...|
 Worm    94 FVNDEQINDEEPEFPIRSTRLRSFDLRDGHIFDKGFQ-KKPSEKDFLSVNGTGF------RRGDN 151

  Fly   991 ASGASGEVIDGDPNVPAYKIAML---GASGVGKTTLT---YQFTTSDYICAYDLSLDDDYGQ--- 1046
            ......::...|......|..:|   ||...||.:|.   :.|.||   .|.:....|:.|.   
 Worm   152 RRATCPDIFLFDSQNCLMKHVVLRIYGARNCGKKSLANRIHHFATS---MAPERVDPDENGNDYT 213

  Fly  1047 KTVSVLVDNIETDLEIIDHPACEMSTEAFCATYNIDLFVVVYSVIDRNTFAAAERVLQYLK---- 1107
            |..:.|::..|..|||:.....|.|......|    |::|:|::.:|.:|..|.::|:.:.    
 Worm   214 KMTTFLLNGREVTLEILLESTLENSPFRQSKT----LYIVMYNMDNRQSFIYATQILERITLANL 274

  Fly  1108 ENEMLLSRGAILVANKTDLQRHRVVTRQMGRKVAKEIACKFIETSSGLDHNVDELLVGIVAQVKL 1172
            .|.:.|.  ..|:.||.||:|::|::...|:.||:...|.|:|.|:.|..|.:|....|:.:::.
 Worm   275 NNPVPLQ--LFLIGNKCDLKRNQVISTNEGKSVARTFKCDFLEVSALLGMNTEETWTTILKELQE 337

  Fly  1173 NPQRLR 1178
            ..:|.|
 Worm   338 PSERRR 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42541NP_996345.3 Amelogenin <477..>550 CDD:197891
RGK 1008..>1175 CDD:206715 49/179 (27%)
F20D6.8NP_505105.2 P-loop containing Nucleoside Triphosphate Hydrolases 170..335 CDD:476819 49/173 (28%)
Blue background indicates that the domain is not in the aligned region.

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