DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42541 and Gem

DIOPT Version :10

Sequence 1:NP_996345.3 Gene:CG42541 / 31344 FlyBaseID:FBgn0260658 Length:1418 Species:Drosophila melanogaster
Sequence 2:NP_034406.2 Gene:Gem / 14579 MGIID:99844 Length:295 Species:Mus musculus


Alignment Length:294 Identity:85/294 - (28%)
Similarity:123/294 - (41%) Gaps:78/294 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   906 MTERQRLRTSSMPAESRRPRLAEMRRSAIHAGDPDMTYYRLRSFSITSHGICNLGDSLRSRRSRS 970
            |..:||.   |:||::|...:.:         ||..               ||    ||:|.|  
Mouse    15 MQPQQRW---SIPADARHLMVQK---------DPHP---------------CN----LRNRHS-- 46

  Fly   971 INSVTSTGTSNSGVDRH--NSNASGASGEVIDGDPNVPAYKIAMLGASGVGKTTLTYQFT----T 1029
                       :..:.|  .|.:|.::..||..:.....|::.::|..||||:||...|.    :
Mouse    47 -----------TAPEEHCRRSWSSDSTDSVISSESGNTYYRVVLIGEQGVGKSTLANIFAGVHDS 100

  Fly  1030 SDYIC------AYDLSLDDDYGQKTVSVLVDNIETDLE---IIDHPACEMSTEAFCATYNIDLFV 1085
            .|..|      .|:.:|..| |:....:|:|..|...|   :.||          |.... |.::
Mouse   101 MDSDCEVLGEDTYERTLVVD-GESATIILLDMWENKGENEWLHDH----------CMQVG-DAYL 153

  Fly  1086 VVYSVIDRNTFAAAERVLQYLKENEMLLSRGAILVANKTDLQRHRVVTRQMGRKVAKEIACKFIE 1150
            :|||:.||.:|..|..:...|:..........|||.||:||.|.|.|:...||..|....|||||
Mouse   154 IVYSITDRASFEKASELRIQLRRARQTEDIPIILVGNKSDLVRCREVSVSEGRACAVVFDCKFIE 218

  Fly  1151 TSSGLDHNVDELLVGIVAQVKL-------NPQRL 1177
            ||:.:.|||.||..|||.||:|       |.:||
Mouse   219 TSAAVQHNVKELFEGIVRQVRLRRDSKEKNERRL 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42541NP_996345.3 Amelogenin <477..>550 CDD:197891
RGK 1008..>1175 CDD:206715 63/186 (34%)
GemNP_034406.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 39..64 9/41 (22%)
RGK 75..295 CDD:206715 65/190 (34%)
Calmodulin-binding 265..284
Blue background indicates that the domain is not in the aligned region.

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