DRSC/TRiP Functional Genomics Resources

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Protein Alignment VhaAC39-1 and VMA6

DIOPT Version :9

Sequence 1:NP_570080.1 Gene:VhaAC39-1 / 31342 FlyBaseID:FBgn0285910 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_013552.3 Gene:VMA6 / 851168 SGDID:S000004439 Length:345 Species:Saccharomyces cerevisiae


Alignment Length:350 Identity:164/350 - (46%)
Similarity:229/350 - (65%) Gaps:11/350 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GFMFNIDNGYLEGLCRGFKCGILKQADYLNLVQCETLEDLKLHLQGTDYGSFLANEPS-PLSVSV 68
            |..||||||::||:.||::.|:|....|:||.||:|||||||.|..||||:||::..| .|:.|:
Yeast     3 GVYFNIDNGFIEGVVRGYRNGLLSNNQYINLTQCDTLEDLKLQLSSTDYGNFLSSVSSESLTTSL 67

  Fly    69 IDDKLREKLVIEFQHMRNHAVEPLSNFLDFITYGYMIDNIILLITGTLHQRPISELIPKCHPLGS 133
            |.:....||..||.::|:.:......|:|:|||||||||:.|:||||:|.|...|::.:|||||.
Yeast    68 IQEYASSKLYHEFNYIRDQSSGSTRKFMDYITYGYMIDNVALMITGTIHDRDKGEILQRCHPLGW 132

  Fly   134 FEQMEAIHVASTPAELYNAVLVDTPLAPFFVDCI-SEQDLDEMNIEIIRNTLYKAYLEAFYNF-C 196
            |:.:..:.||:....||..|||||||||:|.:|. :.::||:||||||||.|||||||.|||| .
Yeast   133 FDTLPTLSVATDLESLYETVLVDTPLAPYFKNCFDTAEELDDMNIEIIRNKLYKAYLEDFYNFVT 197

  Fly   197 KNMGGATADVMCEILAFEADRRAIIITINSF-GTELSKDDRAKLYPNCGKMYPDGLAALARADDY 260
            :.:.....:.|..:|.||||||:|.|.:||. .:::..|.::.|.||.||:||.....||:|.|:
Yeast   198 EEIPEPAKECMQTLLGFEADRRSINIALNSLQSSDIDPDLKSDLLPNIGKLYPLATFHLAQAQDF 262

  Fly   261 EQVKTVAEYYAEYAALFDGSGNNPGDKTLEDKFFEHEVKLDVYAFLQQFHFGVFYAYLKLKEQEC 325
            |.|:.......||....: :||      |||.|::.|::|...||.|||.....:|::|.||||.
Yeast   263 EGVRAALANVYEYRGFLE-TGN------LEDHFYQLEMELCRDAFTQQFAISTVWAWMKSKEQEV 320

  Fly   326 RNIVWIAECVAQKHRAKIDNYIPIF 350
            |||.|||||:||..|.:|:|||.::
Yeast   321 RNITWIAECIAQNQRERINNYISVY 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VhaAC39-1NP_570080.1 vATP-synt_AC39 15..343 CDD:396538 153/331 (46%)
VMA6NP_013552.3 NtpC 1..345 CDD:224444 164/348 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157344491
Domainoid 1 1.000 294 1.000 Domainoid score I229
eggNOG 1 0.900 - - E1_COG1527
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3444
Inparanoid 1 1.050 313 1.000 Inparanoid score I468
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54196
OrthoFinder 1 1.000 - - FOG0001865
OrthoInspector 1 1.000 - - otm46777
orthoMCL 1 0.900 - - OOG6_101546
Panther 1 1.100 - - LDO PTHR11028
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1625
SonicParanoid 1 1.000 - - X1221
TreeFam 1 0.960 - -
1514.790

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