DRSC/TRiP Functional Genomics Resources

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Protein Alignment VhaAC39-1 and atp6v0d2

DIOPT Version :10

Sequence 1:NP_570080.1 Gene:VhaAC39-1 / 31342 FlyBaseID:FBgn0285910 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_989362.1 Gene:atp6v0d2 / 394992 XenbaseID:XB-GENE-957143 Length:350 Species:Xenopus tropicalis


Alignment Length:349 Identity:256/349 - (73%)
Similarity:301/349 - (86%) Gaps:0/349 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNSSGFMFNIDNGYLEGLCRGFKCGILKQADYLNLVQCETLEDLKLHLQGTDYGSFLANEPSPLS 65
            |.::.|.||:|:||||||.||||.|||:..|||||.|||||||||||||.||||||||||...|:
 Frog     1 MANTEFYFNVDSGYLEGLVRGFKGGILRSTDYLNLAQCETLEDLKLHLQSTDYGSFLANETRQLT 65

  Fly    66 VSVIDDKLREKLVIEFQHMRNHAVEPLSNFLDFITYGYMIDNIILLITGTLHQRPISELIPKCHP 130
            ||:||.:|::||:.||.:.||||.|||:.|||||||.||||||||||||||||||||||:|||||
 Frog    66 VSIIDQRLKDKLMAEFHYFRNHAFEPLATFLDFITYSYMIDNIILLITGTLHQRPISELVPKCHP 130

  Fly   131 LGSFEQMEAIHVASTPAELYNAVLVDTPLAPFFVDCISEQDLDEMNIEIIRNTLYKAYLEAFYNF 195
            |||||||||:::|.|||||:||::||||||.||.||:||.|:|||||||:||.|||:||||||.|
 Frog   131 LGSFEQMEAVNIAQTPAELFNAIIVDTPLADFFQDCLSENDMDEMNIEIMRNKLYKSYLEAFYKF 195

  Fly   196 CKNMGGATADVMCEILAFEADRRAIIITINSFGTELSKDDRAKLYPNCGKMYPDGLAALARADDY 260
            ||.:||.|.::||.||.|||||||.:||||||||||:|::|.||||.||:::|:||..|..|||.
 Frog   196 CKKLGGTTEEIMCPILEFEADRRAFVITINSFGTELNKEEREKLYPTCGRLFPEGLRMLGNADDQ 260

  Fly   261 EQVKTVAEYYAEYAALFDGSGNNPGDKTLEDKFFEHEVKLDVYAFLQQFHFGVFYAYLKLKEQEC 325
            :||||.|||||||.|||:|.|...|:|||||||||||||::|.||..||||||||||:|||||||
 Frog   261 DQVKTTAEYYAEYKALFEGVGIGTGEKTLEDKFFEHEVKMNVLAFNNQFHFGVFYAYVKLKEQEC 325

  Fly   326 RNIVWIAECVAQKHRAKIDNYIPI 349
            |||||||||::|:||.||:|||||
 Frog   326 RNIVWIAECISQRHRTKINNYIPI 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VhaAC39-1NP_570080.1 vATP-synt_AC39 15..343 CDD:426553 242/327 (74%)
atp6v0d2NP_989362.1 vATP-synt_AC39 15..338 CDD:426553 239/322 (74%)

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