DRSC/TRiP Functional Genomics Resources

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Protein Alignment VhaAC39-1 and vma6

DIOPT Version :9

Sequence 1:NP_570080.1 Gene:VhaAC39-1 / 31342 FlyBaseID:FBgn0285910 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_594237.1 Gene:vma6 / 2542384 PomBaseID:SPAC17A2.03c Length:343 Species:Schizosaccharomyces pombe


Alignment Length:342 Identity:189/342 - (55%)
Similarity:248/342 - (72%) Gaps:5/342 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FNIDNGYLEGLCRGFKCGILKQADYLNLVQCETLEDLKLHLQGTDYGSFLANEPSPLSVSVIDDK 72
            ||.::||:|.|.||::..:|:|..|.||.|||:|||.:|.|..||||.||||: |.|:.|:|..|
pombe     6 FNTNSGYIEALVRGYESALLEQHIYSNLSQCESLEDFRLQLSSTDYGGFLANQ-SKLTSSIISAK 69

  Fly    73 LREKLVIEFQHMRNHAVEPLSNFLDFITYGYMIDNIILLITGTLHQRPISELIPKCHPLGSFEQM 137
            ..|||:.||..:|..|.|.||.|:|:|||.||||||:||:|||::.:...:|:.:|||||.||.:
pombe    70 ATEKLLDEFDLIRRQADETLSKFMDYITYAYMIDNIMLLLTGTVNGQDTHDLLERCHPLGWFETL 134

  Fly   138 EAIHVASTPAELYNAVLVDTPLAPFFVDCISEQDLDEMNIEIIRNTLYKAYLEAFYNFCKNMGGA 202
            .|:.||:...|||:.||::|||||:|.||:|..||||.:||||||||||||||.||||||.:|..
pombe   135 PALCVATNVEELYSVVLIETPLAPYFKDCLSADDLDEQHIEIIRNTLYKAYLEDFYNFCKKIGAC 199

  Fly   203 TADVMCEILAFEADRRAIIITINSFGTELSKDDRAKLYPNCGKMYPDGLAALARADDYEQVKTVA 267
            |||.|..||.||||||||.||||||||||||::|||:||:.|::||...:.||||::...|:...
pombe   200 TADTMLPILEFEADRRAITITINSFGTELSKEERAKMYPSFGRLYPFSTSILARAENAGDVENAC 264

  Fly   268 EYYAEYAALFDGSGNNPGDKTLEDKFFEHEVKLDVYAFLQQFHFGVFYAYLKLKEQECRNIVWIA 332
            ....||:..||.:    ..|:|:|.|.|.||:|:..|||||||:|:.||:|||:|||.||:.|||
pombe   265 SLVKEYSDFFDQN----SQKSLDDHFNEKEVELNKLAFLQQFHYGIVYAFLKLREQEIRNLTWIA 325

  Fly   333 ECVAQKHRAKIDNYIPI 349
            ||::|..|.:..|.:||
pombe   326 ECISQNQRDRALNIVPI 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VhaAC39-1NP_570080.1 vATP-synt_AC39 15..343 CDD:396538 182/327 (56%)
vma6NP_594237.1 NtpC 1..343 CDD:224444 189/342 (55%)
vATP-synt_AC39 13..331 CDD:280216 180/322 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 364 1.000 Domainoid score I146
eggNOG 1 0.900 - - E1_COG1527
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3444
Inparanoid 1 1.050 380 1.000 Inparanoid score I418
OMA 1 1.010 - - QHG54196
OrthoFinder 1 1.000 - - FOG0001865
OrthoInspector 1 1.000 - - oto101402
orthoMCL 1 0.900 - - OOG6_101546
Panther 1 1.100 - - LDO PTHR11028
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1625
SonicParanoid 1 1.000 - - X1221
TreeFam 1 0.960 - -
1413.860

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