DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2930 and PTR1

DIOPT Version :9

Sequence 1:NP_001284845.1 Gene:CG2930 / 31341 FlyBaseID:FBgn0028491 Length:815 Species:Drosophila melanogaster
Sequence 2:NP_001326764.1 Gene:PTR1 / 824581 AraportID:AT3G54140 Length:570 Species:Arabidopsis thaliana


Alignment Length:737 Identity:164/737 - (22%)
Similarity:273/737 - (37%) Gaps:266/737 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 NVSETEGQQKKLPYPKSVFFIISNEFCERFNYYGMRTVLVLYLSRVLGYSDDTATVVFHIFTMFV 180
            ::.:....::|....|:..||:.||.|||..||||.|.||.||...|...:.||......::...
plant    14 DIHKNPANKEKTGNWKACRFILGNECCERLAYYGMGTNLVNYLESRLNQGNATAANNVTNWSGTC 78

  Fly   181 YFLCVFGAIISDSWLGKFKTILYLSLVYICGSVLLTLGA----IGPLNLPMET---------FTM 232
            |...:.||.|:|::||::.||.....:|:.|..||||.|    :.|.|...:|         ...
plant    79 YITPLIGAFIADAYLGRYWTIATFVFIYVSGMTLLTLSASVPGLKPGNCNADTCHPNSSQTAVFF 143

  Fly   233 LGLALIALGSGGIKPCVSAFGGDQFKVPEQVKQI--TSFFSLFYFSINAGSLISTTVTPILREDV 295
            :.|.:||||:||||||||:||.|||...::.::|  :|||:.||||||.|:||:.||...::.:|
plant   144 VALYMIALGTGGIKPCVSSFGADQFDENDENEKIKKSSFFNWFYFSINVGALIAATVLVWIQMNV 208

  Fly   296 SCFDDINCYPLAFGVPAVLMIVSVIIFVLGRSLYKMKPPAGNMVVLVSSTIWTA---LTTKCKEK 357
            .       :...||||.|.|:::|..|..|...|:::.|.|:.:..:...|..|   ::.|..|.
plant   209 G-------WGWGFGVPTVAMVIAVCFFFFGSRFYRLQRPGGSPLTRIFQVIVAAFRKISVKVPED 266

  Fly   358 KTNPREHWLDYADKKYDRQL------------------------------------IDDVKVLMR 386
            |:...|...|.::.|..|:|                                    ::::|.::.
plant   267 KSLLFETADDESNIKGSRKLVHTDNLKFFDKAAVESQSDSIKDGEVNPWRLCSVTQVEELKSIIT 331

  Fly   387 VLFLYLPLPVFWALFDQQGSRWTFQATRMDGDMG-SWDIKPDQLQVLNPLLILIFIPLYDVALYP 450
            :|.::....||..::.|..:.:..|...||..|| :::|....|.:.:.:.:|.:.|:||..:.|
plant   332 LLPVWATGIVFATVYSQMSTMFVLQGNTMDQHMGKNFEIPSASLSLFDTVSVLFWTPVYDQFIIP 396

  Fly   451 -ALKLVGIRR---PLQKLTMGGILAGIAFIISGVVELSLEKTYPDLPYSQNIQLRIFNADNCDYF 511
             |.|.....|   .||::.:|.:::..|.|.:||:|:                :|:      || 
plant   397 LARKFTRNERGFTQLQRMGIGLVVSIFAMITAGVLEV----------------VRL------DY- 438

  Fly   512 FTSNIPGAENVTVTSLNAYTNKDIYAPGSLDVEFSLSSASEACTISADKIPKVLTDNTAWSLFLN 576
                        |.:.|||..|.|:                                        
plant   439 ------------VKTHNAYDQKQIH---------------------------------------- 451

  Fly   577 PLNGSGYYWEEDFVDKPSQSHPLIRNVANVPQELSIRWEKASTGEVVYDDLASKTLLTRVNSAEY 641
                                                                             
plant   452 ----------------------------------------------------------------- 451

  Fly   642 VVMVGERNVGTFDVHTGGVYTLLIKDNNNIYEANLEEVTSPNSVKILWLVPQYVVMTLGEVMFSV 706
                                                       :.|.|.:|||:::...||...:
plant   452 -------------------------------------------MSIFWQIPQYLLIGCAEVFTFI 473

  Fly   707 TGLEFSYAQAPPSMKSVLQACWLLTVAFGNVIVVVIAEAALFESQASE----------------- 754
            ..|||.|.|||.:|:|:..|..|.|||.||.:..|:....:..::.:.                 
plant   474 GQLEFFYDQAPDAMRSLCSALSLTTVALGNYLSTVLVTVVMKITKKNGKPGWIPDNLNRGHLDYF 538

  Fly   755 FFLFAGLMFADMLIFMVMAYYY 776
            |:|.|.|.|.:.|:::.::..|
plant   539 FYLLATLSFLNFLVYLWISKRY 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2930NP_001284845.1 2A1704 145..776 CDD:273343 154/706 (22%)
PTR2 198..504 CDD:279226 97/364 (27%)
PTR1NP_001326764.1 MFS_NPF8 28..561 CDD:340976 163/723 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 120 1.000 Domainoid score I1880
eggNOG 1 0.900 - - E1_COG3104
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 222 1.000 Inparanoid score I1193
OMA 1 1.010 - - QHG55282
OrthoDB 1 1.010 - - D365203at2759
OrthoFinder 1 1.000 - - FOG0000101
OrthoInspector 1 1.000 - - otm3215
orthoMCL 1 0.900 - - OOG6_100318
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X63
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.780

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