DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2930 and AT3G25280

DIOPT Version :9

Sequence 1:NP_001284845.1 Gene:CG2930 / 31341 FlyBaseID:FBgn0028491 Length:815 Species:Drosophila melanogaster
Sequence 2:NP_189165.1 Gene:AT3G25280 / 822122 AraportID:AT3G25280 Length:521 Species:Arabidopsis thaliana


Alignment Length:691 Identity:128/691 - (18%)
Similarity:220/691 - (31%) Gaps:259/691 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 EPDQNDKEPDQNGKELAETNDFKNVSETEGQQKKLPYPKSVFFIISNE----FCERFNYYGMRTV 153
            |.|..:|..|..|||           ...|:...:.....|..::..|    ....||:      
plant     2 ENDMEEKFEDWKGKE-----------AIPGKHGGIRAASIVCVVVMMENIVFIANGFNF------ 49

  Fly   154 LVLYLSRVLGYSDDTATVVFHIFTMFVYFLCVFGAIISDSWLGKFKTILYLSLVYICGSVLLTLG 218
             |.|....:.|:..||..:...|....:.|.:||..|:||::..|.|.:....:.:.|.:|||..
plant    50 -VKYFMGSMHYTPATAANMVTNFMGTSFLLTLFGGFIADSFVTHFTTFIVFCCIELMGLILLTFQ 113

  Fly   219 AIGPLNLPMETFT---------MLGLALIALGSGGIKPCVSAFGGDQFKVPEQVKQITSFFSLFY 274
            |..|..||.:..|         ..||..:|:|:||:|..:.:.||||.. ....:.|:.||...|
plant   114 AHNPKLLPEKDKTPSTLQSAILFTGLYAMAIGTGGLKASLPSHGGDQID-RRNPRLISRFFDWLY 177

  Fly   275 FSINAGSLISTTVTPILREDVSCFDDINCYPLAFGVPAVLMIVSVIIFVLGRSLYKMKPPAGNMV 339
            |||.:|.|::.||       |...::...:..:|.:...::..::.||.:|...|:.|.|.|:.:
plant   178 FSICSGCLLAVTV-------VLWIEEKKGWIWSFNISVGILATALCIFTVGLPFYRFKRPNGSPL 235

  Fly   340 VLVSSTIWTALTTKCK---------------EKKTNPREHWLDYA--DKKYDRQLIDDVKVLMRV 387
            ..::..|.:|...:.|               :..::.:..|:|.|  :|......:::.:.    
plant   236 KKIAIVIISAARNRNKSDLDEEMMRGLISIYKNNSHNKLKWIDKATLNKNISETEVEETRT---- 296

  Fly   388 LFLYLPLPVFWALFDQQGSRWTFQATRMDGDMG---------SWDIKPDQLQVLNPLLILIFIPL 443
             ||.| ||:|.:....  |....|.:......|         |::|....|..:..:.:|:.|||
plant   297 -FLGL-LPIFGSTIVM--SCCVAQLSTFSAQQGMLMNKKLFHSFEIPVPSLTAIPLIFMLLSIPL 357

  Fly   444 YDVALYPALKLVGIRRPLQKLTMGGILAGIAFIISGVVELSLEKTYPDLPYSQNIQLRIFNADNC 508
            |:                                                               
plant   358 YE--------------------------------------------------------------- 359

  Fly   509 DYFFTSNIPGAENVTVTSLNAYTNKDIYAPGSLDVEFSLSSASEACTISADKIPKVLTDNTAWSL 573
              ||...|....|...:|.|.         ..:.:..:|||.|.|  :||               
plant   360 --FFGKKISSGNNNRSSSFNL---------KRIGLGLALSSVSMA--VSA--------------- 396

  Fly   574 FLNPLNGSGYYWEEDFVDKPSQSHPLIRNVANVPQELSIRWEKASTGEVVYDDLASKTLLTRVNS 638
                            :.:..:.|                       |||:              
plant   397 ----------------IVEAKRKH-----------------------EVVH-------------- 408

  Fly   639 AEYVVMVGERNVGTFDVHTGGVYTLLIKDNNNIYEANLEEVTSPNSVKILWLVPQYVVMTLGEVM 703
                                          ||.            .:.:||||.||:::::.:::
plant   409 ------------------------------NNF------------RISVLWLVFQYLMLSVSDML 431

  Fly   704 FSVTGLEFSYAQAPPSMKSVLQACWLLTVAFGNVIVVVIAE 744
            .....|||.|.:||.:|||:..|....:.|.|..:...:.|
plant   432 TLGGMLEFFYREAPSNMKSISTALGWCSTALGFFLSTTLVE 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2930NP_001284845.1 2A1704 145..776 CDD:273343 118/635 (19%)
PTR2 198..504 CDD:279226 66/340 (19%)
AT3G25280NP_189165.1 MFS 93..486 CDD:304372 104/582 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 120 1.000 Domainoid score I1880
eggNOG 1 0.900 - - E1_COG3104
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 222 1.000 Inparanoid score I1193
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D365203at2759
OrthoFinder 1 1.000 - - FOG0000101
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.870

Return to query results.
Submit another query.