DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2930 and AT3G25260

DIOPT Version :9

Sequence 1:NP_001284845.1 Gene:CG2930 / 31341 FlyBaseID:FBgn0028491 Length:815 Species:Drosophila melanogaster
Sequence 2:NP_189163.1 Gene:AT3G25260 / 822120 AraportID:AT3G25260 Length:515 Species:Arabidopsis thaliana


Alignment Length:567 Identity:123/567 - (21%)
Similarity:230/567 - (40%) Gaps:127/567 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 DQNDKEPDQNGKELAETNDFKNVSETEGQQKKLPYPKSVFFIISNEFCERFNYYGMRTVLVLYLS 159
            :..:|..|..|||.        :|...|.      .|:.|.....|..|...:....|..::|.:
plant     4 EMEEKFEDWRGKEA--------ISGKHGG------IKAAFIACVVETMENMVFLACSTNFMMYFT 54

  Fly   160 RVLGYSDDTATVVFHIFTMFVYFLCVFGAIISDSWLGKFKTILYLSLVYICGSVLLTLGA----I 220
            :.:.||...|..:...|....:.|.:||..::||:|.:|...:....:.:.|.::|||.|    :
plant    55 KSMNYSTPKAATMVTNFVGTSFLLTIFGGFVADSFLTRFAAFVLFGSIELLGLIMLTLQAHITKL 119

  Fly   221 GPL-----NLPMETFTMLGLALIALGSGGIKPCVSAFGGDQFKVPEQVKQITSFFSLFYFSINAG 280
            .|.     :.|..|....||..||:|.||:|..:.|.||||.....| :.|:.||:.::||:..|
plant   120 QPQGGKKPSTPQSTVLFTGLYAIAIGVGGVKGSLPAHGGDQIGTRNQ-RLISGFFNWYFFSVCLG 183

  Fly   281 SLISTTVTPILREDVSCFDDINCYPLAFGVPAVLMIVSVIIFVLGRSLYKMKPPAGNMVVLVSST 345
            ..::.|:...:.|::.       :..:|.:...::..::.:||.|..:|:.|.|||:.:..:.:.
plant   184 GFLAVTLMVWIEENIG-------WSSSFTISTAVLASAIFVFVAGCPMYRFKRPAGSPLTRIVNV 241

  Fly   346 IWTALTTKCK-----------EKKTNPREH-----WLDYA--DKKYDRQLIDDVKVLMRVLFLYL 392
            ..:|...:.:           ...|:...|     :|:.|  :.|.....:::.:.     ||.|
plant   242 FVSAARNRNRFVTDAEVVTQNHNSTDKSIHHNKFKFLNKAKLNNKISATQVEETRT-----FLAL 301

  Fly   393 PLPVFWALFDQQGSRWTFQATRMDGDMGSWDIKPDQLQVLN---------PLLILIFIPLY---- 444
             ||:|       ||  |.........||::.::  |..|.|         |:..|..|||.    
plant   302 -LPIF-------GS--TIIMNCCVAQMGTFSVQ--QGMVTNRKLSRSFEIPVASLNAIPLLCMLS 354

  Fly   445 DVALYPALKLVGIR----------RPLQKLTMGGILAGIAFIISGVVELSLEKTYPDLPYSQNIQ 499
            .:|||   :|.|.|          ..|:::..|..|..|:..::.:||:..:..    ....||:
plant   355 SLALY---ELFGKRILSNSERSSSFNLKRIGYGLALTSISMAVAAIVEVKRKHE----AVHNNIK 412

  Fly   500 LRIFNADNCDYFFTSNIPGAENVTVTSLNAYTNKDIYAPGSLDVEFSLSSASEACTIS-----AD 559
            :.:|..:.  .|...::  ::.:||..:..:..::  :|.|:.   |:|:|...|:.:     :.
plant   413 ISVFWLEL--QFVMLSL--SDMLTVGGMLEFFFRE--SPASMR---SMSTALGWCSTAMGFFLSS 468

  Fly   560 KIPKVLTDNTAW----------SLF------LNPLNGSGY-YWEEDF 589
            .:.:|:...|.|          .||      ||.||...| :|.:.:
plant   469 VLVEVVNGITGWLRDDLNESRLELFYLVLCVLNTLNLFNYIFWAKRY 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2930NP_001284845.1 2A1704 145..776 CDD:273343 112/517 (22%)
PTR2 198..504 CDD:279226 79/355 (22%)
AT3G25260NP_189163.1 MFS 93..481 CDD:304372 91/428 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 120 1.000 Domainoid score I1880
eggNOG 1 0.900 - - E1_COG3104
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 222 1.000 Inparanoid score I1193
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D365203at2759
OrthoFinder 1 1.000 - - FOG0000101
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X63
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.870

Return to query results.
Submit another query.