DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2930 and PTR4

DIOPT Version :9

Sequence 1:NP_001284845.1 Gene:CG2930 / 31341 FlyBaseID:FBgn0028491 Length:815 Species:Drosophila melanogaster
Sequence 2:NP_178311.1 Gene:PTR4 / 814733 AraportID:AT2G02020 Length:545 Species:Arabidopsis thaliana


Alignment Length:659 Identity:155/659 - (23%)
Similarity:244/659 - (37%) Gaps:233/659 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 VSETEGQQKKLPYPKSVFFIISNEFCERFNYYGMRTVLVLYLSRVLGYSDDTATVVFHIFTM--F 179
            :.:|.|..|..|      ||.:||.|||..|||:...|:.|.:..|  .:...:...|:.|.  .
plant    39 LKQTTGNWKACP------FIFANECCERLAYYGIAKNLITYFTNEL--HETNVSAARHVMTWQGT 95

  Fly   180 VYFLCVFGAIISDSWLGKFKTILYLSLVYICGSVLLTLGA----------IG----PLNLPMETF 230
            .|...:.||:|:|::.|::.||...|.:|..|.|.|||.|          ||    |..:...|.
plant    96 CYITPLIGALIADAYWGRYWTIACFSAIYFTGMVALTLSASVPGLKPAECIGSLCPPATMVQSTV 160

  Fly   231 TMLGLALIALGSGGIKPCVSAFGGDQFKVPEQVKQI--TSFFSLFYFSINAGSLISTTVTPILRE 293
            ...||.|||||:||||||||:||.|||...:..:::  .|||:.|||:||.|:.:|:||...::|
plant   161 LFSGLYLIALGTGGIKPCVSSFGADQFDKTDPSERVRKASFFNWFYFTINIGAFVSSTVLVWIQE 225

  Fly   294 DVSCFDDINCYPLAFGVPAVLMIVSVIIFVLGRSLYKMKPPAGNMVVLVSSTIWTAL-------- 350
            :..       :.|.|.:|.|.|.::.:.|..|..||:.:.|.|:.:..|...:..|.        
plant   226 NYG-------WELGFLIPTVFMGLATMSFFFGTPLYRFQKPRGSPITSVCQVLVAAYRKSNLKVP 283

  Fly   351 --TTKCKEKKTNPREHWLDYADKKYDRQLIDDVKVLMRVLFLYLPLPVFWALFDQQGSRWTFQAT 413
              :|...:..|||   |     |......:::||:|:|::.::....:|..|..|..:.:..|..
plant   284 EDSTDEGDANTNP---W-----KLCTVTQVEEVKILLRLVPIWASGIIFSVLHSQIYTLFVQQGR 340

  Fly   414 RMDGDMGSWDIKPDQLQVLNPLLILIFIPLYDVALYPALKLVGIRRPLQKLTMGGILAGIAFIIS 478
            .|...:|.::|.|..|.:.:...:||.:|:||..:.|.     :||          ..|:|   .
plant   341 CMKRTIGLFEIPPATLGMFDTASVLISVPIYDRVIVPL-----VRR----------FTGLA---K 387

  Fly   479 GVVELSLEKTYPDLPYSQNIQLRIFNADNCDYFFTSNIPGAENVTVTSLNAYTNKDIYAPGSLDV 543
            |..||            |.:.:.:|                  |:|.||                
plant   388 GFTEL------------QRMGIGLF------------------VSVLSL---------------- 406

  Fly   544 EFSLSSASEACTISADKIPKVLTDNTAWSLFLNPLNGSGYYWEEDFVDKPSQSHPLIRNVANVPQ 608
                       |.:|                                           .|..|..
plant   407 -----------TFAA-------------------------------------------IVETVRL 417

  Fly   609 ELSIRWEKASTGEVVYDDLASKTLLTRVNSAEYVVMVGERNVGTFDVHTGGVYTLLIKDNNNIYE 673
            :|:...:...:|::|                                                  
plant   418 QLARDLDLVESGDIV-------------------------------------------------- 432

  Fly   674 ANLEEVTSPNSVKILWLVPQYVVMTLGEVMFSVTGLEFSYAQAPPSMKSVLQACWLLTVAFGN-- 736
                      .:.|.|.:|||.:|....|.|.|..:||.|.|:|.||:|:..|..|||...||  
plant   433 ----------PLNIFWQIPQYFLMGTAGVFFFVGRIEFFYEQSPDSMRSLCSAWALLTTTLGNYL 487

  Fly   737 --VIVVVIA 743
              :|:.::|
plant   488 SSLIITLVA 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2930NP_001284845.1 2A1704 145..776 CDD:273343 144/631 (23%)
PTR2 198..504 CDD:279226 93/331 (28%)
PTR4NP_178311.1 PTR2 114..497 CDD:279226 130/576 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 120 1.000 Domainoid score I1880
eggNOG 1 0.900 - - E1_COG3104
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 222 1.000 Inparanoid score I1193
OMA 1 1.010 - - QHG55282
OrthoDB 1 1.010 - - D365203at2759
OrthoFinder 1 1.000 - - FOG0000101
OrthoInspector 1 1.000 - - otm3141
orthoMCL 1 0.900 - - OOG6_100318
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X63
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.780

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