DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2930 and AT3G54450

DIOPT Version :9

Sequence 1:NP_001284845.1 Gene:CG2930 / 31341 FlyBaseID:FBgn0028491 Length:815 Species:Drosophila melanogaster
Sequence 2:NP_974431.2 Gene:AT3G54450 / 2745964 AraportID:AT3G54450 Length:555 Species:Arabidopsis thaliana


Alignment Length:716 Identity:147/716 - (20%)
Similarity:262/716 - (36%) Gaps:263/716 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 SVFFIISNEFCERFNYYGMRTVLVLYLSRVLGYSDDTATVVFHIFTMFVYFLCVF---GAIISDS 193
            :..|||..|..|||.:||:.:.|:.:|:..||.|  |||...:|.| ::...|:|   ||.::||
plant    18 AALFIIVVEIAERFAFYGLASNLITFLTNELGQS--TATAAKNINT-WIGVSCMFPILGAFLADS 79

  Fly   194 WLGKFKTILYLSLVYICGSVLLTLGAIGPLNLPMETFTMLGLALIALGSGGIKPCVSAFGGDQF- 257
            .||:|||:|..|.:|:.|.|:|.|..........|....:.|.::|:|.||.||||..|..||| 
plant    80 ILGRFKTVLLTSFIYLLGIVMLPLSVTVVARRMREKVFFMALYVMAVGEGGHKPCVMTFAADQFG 144

  Fly   258 -KVPEQVKQITSFFSLFYFSINAGSLISTTVTPILREDVSCFDDINCYPLAFGVPAVLMIVSVII 321
             ...|:....||||:.:|.:|...|.|:......::|.||       :.|.|.:.|..::::::|
plant   145 EANAEEKAAKTSFFNYWYMAIVLASSIAVLALIFIQERVS-------WSLGFSIIAGSVVIAIVI 202

  Fly   322 FVLGRSLYKMKPPAGN------MVVLVSSTIWTALTTK-----CKEKK-------TNPREHWL-- 366
            |::|...|:.:.|.|:      .|::.:...|...:|:     |.|::       ||..:.:|  
plant   203 FLIGIPKYRKQVPVGSPFTRVAQVMVAALKKWRLSSTRHHYGLCYEEEDEHKLESTNSNQVYLLA 267

  Fly   367 --------------DYADKKYDR--------QLIDDVKVLMRVLFLYLPLPVFWALFDQQGSRWT 409
                          |..|...:|        ..:::||:::|::.:::.|.:|.|...|..:.:.
plant   268 RTNQFRFLDKATIIDEIDHNKNRNPWRLCTVNQVEEVKLILRLIPIWISLIMFCATLTQLNTFFL 332

  Fly   410 FQATRMDGDMGS-WDIKPDQLQVLNPLLILIFIPLYDVALYPALKLV-----GIRRPLQKLTMGG 468
            .|.:.||..:|: :.|.|...|.:..:.|||.|||||....|.::.:     || ..||::.:|.
plant   333 KQGSMMDRTIGNHFTIPPAAFQSIVGVTILILIPLYDRVFVPMVRKITNHHSGI-TSLQRIGVGL 396

  Fly   469 ILAGIAFIISGVVELSLEKTYPDLPYSQNIQLRIFNADNCDYFFTSNIPGAENVTVTSLNAYTNK 533
            .:|....:|.|:||.                                                  
plant   397 FVATFNMVICGLVEA-------------------------------------------------- 411

  Fly   534 DIYAPGSLDVEFSLSSASEACTISADKIPKVLTDNTAWSLFLNPLNGSGYYWEEDFVDKPSQSHP 598
                                      |..||..|:                   ..:|.|.:..|
plant   412 --------------------------KRLKVARDH-------------------GLIDSPKEVVP 431

  Fly   599 LIRNVANVPQELSIRWEKASTGEVVYDDLASKTLLTRVNSAEYVVMVGERNVGTFDVHTGGVYTL 663
            :                                                                
plant   432 M---------------------------------------------------------------- 432

  Fly   664 LIKDNNNIYEANLEEVTSPNSVKILWLVPQYVVMTLGEVMFSVTGL-EFSYAQAPPSMKSVLQAC 727
                                  ..|||:|||:::.:|:| |::.|: |..|.|.|.:|:|:..|.
plant   433 ----------------------SSLWLLPQYILVGIGDV-FTIVGMQELFYDQMPETMRSIGAAI 474

  Fly   728 WLLTVAFGNVIV--VVIAEAALFESQASE--------------FFLFAGLMFADMLIFMVMAYYY 776
            ::..|..|:.:.  ::.....:.:|...|              :::.|.|....:..::.:|.::
plant   475 FISVVGVGSFVSTGIISTVQTISKSHGEEWLVNNLNRAHLDYYYWIIASLNAVSLCFYLFIANHF 539

  Fly   777 V 777
            :
plant   540 L 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2930NP_001284845.1 2A1704 145..776 CDD:273343 141/700 (20%)
PTR2 198..504 CDD:279226 89/355 (25%)
AT3G54450NP_974431.2 MFS_NPF5 16..541 CDD:340975 147/716 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 120 1.000 Domainoid score I1880
eggNOG 1 0.900 - - E1_COG3104
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 222 1.000 Inparanoid score I1193
OMA 1 1.010 - - QHG55282
OrthoDB 1 1.010 - - D365203at2759
OrthoFinder 1 1.000 - - FOG0000101
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X63
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.880

Return to query results.
Submit another query.