DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2930 and Slc15a4

DIOPT Version :9

Sequence 1:NP_001284845.1 Gene:CG2930 / 31341 FlyBaseID:FBgn0028491 Length:815 Species:Drosophila melanogaster
Sequence 2:NP_653359.1 Gene:Slc15a4 / 246280 RGDID:708469 Length:572 Species:Rattus norvegicus


Alignment Length:722 Identity:137/722 - (18%)
Similarity:251/722 - (34%) Gaps:277/722 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 IISNEFCERFNYYGMRTVLVLYLSRV-LGYSDDTATVVFHIFTMFVYFLCVFGAIISDSWLGKFK 199
            ::..|..||..:||:...|||:|:.. ..:....|:....:|....|....||..::|:.||:.:
  Rat    31 VLLAELLERAAFYGVTANLVLFLNGAPFNWEGAQASQALLLFMGLTYLGSPFGGWLADARLGRAR 95

  Fly   200 TILYLSLVYICGSVLLTLGA----------------IGPLNLPMET---------------FTML 233
            .||....:|:.|.:...|.|                :...:.|...               .|..
  Rat    96 AILLSLALYLLGMLAFPLLAAPRSRSFLCGDPHPELVRNCSAPFPNGTAVCPDAAARRCAPATFA 160

  Fly   234 GLALIALGSGGIKPCVSAFGGDQFK--VPEQVKQITSFFSLFYFSINAGSLISTTVTPILREDVS 296
            ||.|:.||...:|..::.||.||.|  .||..::   ||:.||:|||.|:::|......::::||
  Rat   161 GLVLVGLGVATVKANITPFGADQVKDRGPEATRR---FFNWFYWSINLGAILSLGGIAYIQQNVS 222

  Fly   297 CFDDINCYPLAFGVPAVLMIVSVIIFVLGRSLYKMKPPAGNMVVLVSSTIWTALTTKCKEKKTNP 361
                   :...:.:|.|.:.::.::|:.|:|::..|||.|:    ..:.::..||..|..::...
  Rat   223 -------FLTGYLIPTVCVAIAFLVFLCGQSVFITKPPDGS----AFTDMFRILTYSCCSQRGGQ 276

  Fly   362 R-------------EHWLDYADK-----KYDRQLIDDVKVLMRVLFLYLPLPVFWALFDQQGSRW 408
            |             :|.|..:.|     .:....::|||.|::::.::|.|..:|.::.|..:.:
  Rat   277 RRSGEGLGVFQQSSKHSLFDSCKMSRGGPFTEDKVEDVKALVKIVPVFLALIPYWTVYFQMQTTY 341

  Fly   409 TFQATRMD-GDMGS-----------WDIKPDQLQVLNPLLILIFIPLYDVALYPALKLVGIRRPL 461
            ..|:..:. .::.|           |      |.:.:.:|||:.|||.|..:.|.|:    |..|
  Rat   342 VLQSLHLKIPEISSITTTHHTLPAAW------LTMFDAVLILLLIPLKDKLVDPVLR----RHGL 396

  Fly   462 QKLTMGGILAGIAFIISGVVELSLEKTYPDLPYSQNIQLRIFNADNCDYFFTSNIPGAENVTVTS 526
            ...::..|..|:.|:                              .|..|               
  Rat   397 LPSSLKRIAVGMFFV------------------------------TCSAF--------------- 416

  Fly   527 LNAYTNKDIYAPGSLDVEFSLSSASEACTISADKIPKVLTDNTAWSLFLNPLNGSGYYWEEDFVD 591
                      |.|.|:                                                 
  Rat   417 ----------AAGILE------------------------------------------------- 422

  Fly   592 KPSQSHPLIRNVANVPQELSIRWEKASTGEVVYDDLASKTLLTRVNSAEYVVMVGERNVGTFDVH 656
                                                 ||.|          .:|.|:   |.:..
  Rat   423 -------------------------------------SKRL----------DLVKEK---TINQT 437

  Fly   657 TGGVYTLLIKDNNNIYEANLEEVTSPNSVKILWLVPQYVVMTLGEVMFSVTGLEFSYAQAPPSMK 721
            .|||          :|.|        ..:.|.|.:||||::.:.|:..|:.||||:|:.||.||:
  Rat   438 IGGV----------VYHA--------ADLPIWWQIPQYVLIGISEIFASIAGLEFAYSAAPKSMQ 484

  Fly   722 SVLQACWLLTVAFGN-----VIVVVIAEAALFESQASE------------FFLFAGLMFADMLIF 769
            |.:...:......|:     ::.:|..:|..:.|..::            |||.|.:..|.:|:|
  Rat   485 SAIMGLFFFFSGIGSFVGSGLLALVSLKAIGWMSSHTDFGNINSCHLHYYFFLLAAIQGATLLLF 549

  Fly   770 MVMAYYY 776
            ::::..|
  Rat   550 LIVSVKY 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2930NP_001284845.1 2A1704 145..776 CDD:273343 133/711 (19%)
PTR2 198..504 CDD:279226 74/368 (20%)
Slc15a4NP_653359.1 MFS_SLC15A3_4 25..555 CDD:340906 136/719 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3104
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55282
OrthoDB 1 1.010 - - D365203at2759
OrthoFinder 1 1.000 - - FOG0000101
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100318
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X63
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.730

Return to query results.
Submit another query.