DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment yin and PTR2

DIOPT Version :9

Sequence 1:NP_001284844.1 Gene:yin / 31340 FlyBaseID:FBgn0265575 Length:780 Species:Drosophila melanogaster
Sequence 2:NP_013019.1 Gene:PTR2 / 853968 SGDID:S000001801 Length:601 Species:Saccharomyces cerevisiae


Alignment Length:718 Identity:153/718 - (21%)
Similarity:251/718 - (34%) Gaps:266/718 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 EFCERFNYYGMRTILVLYL--------TNKLGYNEETATVLFHTFTMLVYIFPLIGALIADGWLG 136
            |..|||:|||:......|:        ...|..|.:.||.|.:.|....|:.|:.|..:||.:.|
Yeast    89 ELSERFSYYGLSAPFQNYMEYGPNDSPKGVLSLNSQGATGLSYFFQFWCYVTPVFGGYVADTFWG 153

  Fly   137 KYKTILYLSLVYSLGAMVVSFGAVPLSGMPTKAV--TVVGLLLIAIGTGGIKPCVSAFGGDQFSL 199
            ||.||...:.:|..|..::...::|..|....|:  .:..::||.|.||.||..:|....||...
Yeast   154 KYNTICCGTAIYIAGIFILFITSIPSVGNRDSAIGGFIAAIILIGIATGMIKANLSVLIADQLPK 218

  Fly   200 PAQSFQLAK---------------FFSLFYFAINAG--SLISTTFTPILRADVHCFGDQDCFSLA 247
            ...|.::.|               .|..|||.||.|  ||::||     ..:.|     ..|..|
Yeast   219 RKPSIKVLKSGERVIVDSNITLQNVFMFFYFMINVGSLSLMATT-----ELEYH-----KGFWAA 273

  Fly   248 FGVPAILMIFSVIIFMAGKRLYRCQPPAGNMIFGVSRCIADAFK-GWQKRRHSEPMESFLDY--A 309
            :.:|......:|:..:.||:.| .|.|.|:.:      ||.:|| .|...::.      .|:  |
Yeast   274 YLLPFCFFWIAVVTLIFGKKQY-IQRPIGDKV------IAKSFKVCWILTKNK------FDFNAA 325

  Fly   310 KPTV--------GSRMVQETKCLGRILRLFLPFPVFWALFDQQGSRWTFQATRMDGNVLGFQIKP 366
            ||:|        ..:.|.|.|......::|:.:|::|..:....|.:..||:.|:.:    .|..
Yeast   326 KPSVHPEKNYPWNDKFVDEIKRALAACKVFIFYPIYWTQYGTMISSFITQASMMELH----GIPN 386

  Fly   367 DQMQVVNPLLILGFLPLFDYIIYPALARCGIRRPLQKLTLGLLLAALGFFLSAGLEMKMEQAAYR 431
            |.:|..:.:.::.|:|:|:..:||.:.|....:|:.|:..|.:..:.....:|.|    :...|:
Yeast   387 DFLQAFDSIALIIFIPIFEKFVYPFIRRYTPLKPITKIFFGFMFGSFAMTWAAVL----QSFVYK 447

  Fly   432 ATPIEPDMTHLRIYNGMPCRYEISSAVVQTPRVIEPLNVWEDLSLQMTESKEYTFNAQPVSGECP 496
            |.|         .||                   |||.                           
Yeast   448 AGP---------WYN-------------------EPLG--------------------------- 457

  Fly   497 SIIDKLRLQPGKSVSYFLAQDKLVEFADGLQMAATDTGRTSVRALLNTPDGEGPVLLSTESATSQ 561
                                                         .|||:               
Yeast   458 ---------------------------------------------HNTPN--------------- 462

  Fly   562 EPPLTLDKGNVPQLHRITPGFARVDINGKKVASFEAKEGRLYSILVTGSARDGYQHNVIEVVALS 626
                                                                   |         
Yeast   463 -------------------------------------------------------H--------- 463

  Fly   627 TVSILWQLPQIVVMTAAEVMFSVTGLEFSYSQSPPSMKSVLQACWLLS----VAIGNMLVVVIAE 687
             |.:.||:|..|:::.:|:..|:||||::||::|.||||.:.:.:||:    .|||..|..|..:
Yeast   464 -VHVCWQIPAYVLISFSEIFASITGLEYAYSKAPASMKSFIMSIFLLTNAFGSAIGCALSPVTVD 527

  Fly   688 FKFTSSQSGEFTLFASLMLVDMMIFLWLARSYQYKDQRE-----DFEDDDDATIDSVMQSKPKAT 747
            .|||    ..||..|....:...:| ||. ..:|.|..|     |:|::|:..::.:  |.|||.
Yeast   528 PKFT----WLFTGLAVACFISGCLF-WLC-FRKYNDTEEEMNAMDYEEEDEFDLNPI--SAPKAN 584

  Fly   748 TVD 750
            .::
Yeast   585 DIE 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yinNP_001284844.1 2A1704 85..719 CDD:273343 140/675 (21%)
MFS 138..>398 CDD:304372 71/289 (25%)
PTR2NP_013019.1 MFS_PTR2 79..554 CDD:340908 143/681 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 106 1.000 Domainoid score I1443
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 173 1.000 Inparanoid score I993
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55282
OrthoFinder 1 1.000 - - FOG0000101
OrthoInspector 1 1.000 - - otm46596
orthoMCL 1 0.900 - - OOG6_100318
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X63
TreeFam 00.000 Not matched by this tool.
98.870

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