DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment yin and NRT1.6

DIOPT Version :9

Sequence 1:NP_001284844.1 Gene:yin / 31340 FlyBaseID:FBgn0265575 Length:780 Species:Drosophila melanogaster
Sequence 2:NP_174028.2 Gene:NRT1.6 / 839597 AraportID:AT1G27080 Length:576 Species:Arabidopsis thaliana


Alignment Length:748 Identity:151/748 - (20%)
Similarity:255/748 - (34%) Gaps:294/748 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 KSVAFIISNEFCERFNYYGMRTILVLYLTNKLGYNEETATVLFHTFTMLVYIFPLIGALIADGWL 135
            :::.||:.||..|:....|:....:|||.|........|..:::.:..|....||:||||:|.::
plant    19 RAITFILGNETLEKLGSIGVSANFMLYLRNVFHMEPVEAFNVYYLWMGLTNFAPLLGALISDAYI 83

  Fly   136 GKYKTILYLSLVYSLGAMVVSFGAV-------PLSGM-------PTK---AVTVVGLLLIAIGTG 183
            |::|||.|.||...||.|.|:..|.       |.:..       |.|   .:..:||..::||:|
plant    84 GRFKTIAYASLFSILGLMTVTLTACLPQLHPPPCNNPHPDECDDPNKLQLGILFLGLGFLSIGSG 148

  Fly   184 GIKPCVSAFGGDQFSLPAQS--FQLAKFFSLFYFAINAGSLISTTFTPILRADVHCFGDQDCFSL 246
            ||:||...||.|||....:.  ..:|.||:.:|..:....:.|.|....|:......|       
plant   149 GIRPCSIPFGVDQFDQRTEQGLKGVASFFNWYYLTLTMVLIFSHTVVVYLQTVSWVIG------- 206

  Fly   247 AFGVPAILMIFSVIIFMAGKRLYRCQPPAGNMIFGVSRCIADAFKGWQKRR-------------- 297
             |.:|..||..:|::|..|.|.|....|.|::..|::|.|..|    :|:|              
plant   207 -FSIPTSLMACAVVLFFVGMRFYVYVKPEGSVFSGIARVIVAA----RKKRDLKISLVDDGTEEY 266

  Fly   298 HSEPME-------------SFLDYAKPTVGSRM-----------------VQETKCLGRILRLFL 332
            :..|::             .|||.|...:...:                 |:|.|||.|::.::.
plant   267 YEPPVKPGVLSKLPLTDQFKFLDKAAVILDGDLTSEGVPANKWRLCSIQEVEEVKCLIRVVPVWS 331

  Fly   333 PFPVFWALFDQQGSRWTFQATRMDGNVLG--FQIKPDQMQVVNPLLILGFLPLFDYIIYPALARC 395
            ...:.......|.:...||||:||.: :|  |:|....:.|::.:.|..::|::::::.|.|.|.
plant   332 AGIISIVAMTTQATFMVFQATKMDRH-MGPHFEIPAASITVISYITIGIWVPIYEHLLVPFLWRM 395

  Fly   396 GIRRP--LQKLTLGLLLAALGFFLSAGLEMKMEQAAYRATPIEPDMTHLRIYNGMPCRYEISSAV 458
            ...|.  ||::.:|::.|.|..| :||                                      
plant   396 RKFRVTLLQRMGIGIVFAILSMF-TAG-------------------------------------- 421

  Fly   459 VQTPRVIEPLNVWEDLSLQMTESKEYTFNAQPVSGECPSIIDKLRLQPGKSVSYFLAQDKLVEFA 523
                                                                           |.
plant   422 ---------------------------------------------------------------FV 423

  Fly   524 DGLQMAATDTGRTSVRALLNTPDGEGPVLLSTESATSQEPPLTLDKGNVPQLHRITPGFARVDIN 588
            :|::       ||.                :||                                
plant   424 EGVR-------RTR----------------ATE-------------------------------- 433

  Fly   589 GKKVASFEAKEGRLYSILVTGSARDGYQHNVIEVVALSTVSILWQLPQIVVMTAAEVMFSVTGL- 652
                                                ::.:|:.|....:::|...| .|:..|| 
plant   434 ------------------------------------MTQMSVFWLALPLILMGLCE-SFNFIGLI 461

  Fly   653 EFSYSQSPPSMKSVLQACWLLSVAIGN----MLVVVIAEFKFTSS---------QSGE----FTL 700
            ||..||.|..|:|:..:.:.||.|..|    :||..:.:...|..         ..|:    :.|
plant   462 EFFNSQFPEHMRSIANSLFPLSFAAANYLSSLLVTTVHKVSGTKDHPDWLNKDLDRGKLDYFYYL 526

  Fly   701 FASLMLVDMMIFLWLARSYQYK--DQREDFEDD 731
            .|.|.:|:::.|.:.|..||||  .|.|||.::
plant   527 IAVLGVVNLVYFWYCAHRYQYKAGSQIEDFNEE 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yinNP_001284844.1 2A1704 85..719 CDD:273343 138/718 (19%)
MFS 138..>398 CDD:304372 80/324 (25%)
NRT1.6NP_174028.2 MFS 86..504 CDD:304372 115/624 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 120 1.000 Domainoid score I1880
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 222 1.000 Inparanoid score I1193
OMA 1 1.010 - - QHG55282
OrthoDB 1 1.010 - - D365203at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X63
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.980

Return to query results.
Submit another query.