DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment yin and NRT1.1

DIOPT Version :9

Sequence 1:NP_001284844.1 Gene:yin / 31340 FlyBaseID:FBgn0265575 Length:780 Species:Drosophila melanogaster
Sequence 2:NP_563899.1 Gene:NRT1.1 / 837763 AraportID:AT1G12110 Length:590 Species:Arabidopsis thaliana


Alignment Length:757 Identity:156/757 - (20%)
Similarity:258/757 - (34%) Gaps:295/757 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 SVAFIISNEFCERFNYYGMRTILVLYLTNKLGYNEETATVLFHTFTMLVYIFPLIGALIADGWLG 136
            |.|.|:..|..||....|:...||.|||..:.....||......|....::..|:|..|||.:||
plant    33 SAAMILCIEAVERLTTLGIGVNLVTYLTGTMHLGNATAANTVTNFLGTSFMLCLLGGFIADTFLG 97

  Fly   137 KYKTILYLSLVYSLGAMVVSFGAVPLSGM------PTKA------------VTVVGLLLIAIGTG 183
            :|.||...:.:.:.|..:::...: :.|:      ||.:            |..:.|.|.|:|||
plant    98 RYLTIAIFAAIQATGVSILTLSTI-IPGLRPPRCNPTTSSHCEQASGIQLTVLYLALYLTALGTG 161

  Fly   184 GIKPCVSAFGGDQF--SLPAQSFQLAKFFSLFYFAINAGSLISTTFTPILRADVHCFGDQDCFSL 246
            |:|..||.||.|||  :.|.:..::..||:.|:|.||.|||::.|....::.||   |.:    .
plant   162 GVKASVSGFGSDQFDETEPKERSKMTYFFNRFFFCINVGSLLAVTVLVYVQDDV---GRK----W 219

  Fly   247 AFGVPAILMIFSVIIFMAGKRLYRCQPPAGNMIFGVSRCIADAF--------------------- 290
            .:|:.|..::.::.:|:||...||.:...|:.:..|:..|..|:                     
plant   220 GYGICAFAIVLALSVFLAGTNRYRFKKLIGSPMTQVAAVIVAAWRNRKLELPADPSYLYDVDDII 284

  Fly   291 ------KGWQKRRHSEPMESFLDYA---------------KPTVGSRM-VQETKCLGRILRLFLP 333
                  ||.||..|:|...| ||.|               |.|:.:.. |:|.|.:.|:|.::..
plant   285 AAEGSMKGKQKLPHTEQFRS-LDKAAIRDQEAGVTSNVFNKWTLSTLTDVEEVKQIVRMLPIWAT 348

  Fly   334 FPVFWALFDQQGSRWTFQATRMDGNVLGFQIKPDQMQV--VNPLLILGFLPLFDYIIYPALARC- 395
            ..:||.:..|..:....|:..:|.::..|:|.|..|.|  |..||:.  ..::|.:   |:..| 
plant   349 CILFWTVHAQLTTLSVAQSETLDRSIGSFEIPPASMAVFYVGGLLLT--TAVYDRV---AIRLCK 408

  Fly   396 -------GIRRPLQKLTLGLLLAALGFFLSAGLEMKMEQAAYRATPIEPDMTHLRIYNGMPCRYE 453
                   |: ||||::.|||...::...::|.:|:|.                            
plant   409 KLFNYPHGL-RPLQRIGLGLFFGSMAMAVAALVELKR---------------------------- 444

  Fly   454 ISSAVVQTPRVIEPLNVWEDLSLQMTESKEYTFNAQPVSGECPSIIDKLRLQPGKSVSYFLAQDK 518
                                                                             
plant   445 ----------------------------------------------------------------- 444

  Fly   519 LVEFADGLQMAATDTGRTSVRALLNTPDGEGPVLLSTESATSQEPPLTLDKGNVPQLHRITPGFA 583
                                   |.|....||        |.:..||               || 
plant   445 -----------------------LRTAHAHGP--------TVKTLPL---------------GF- 462

  Fly   584 RVDINGKKVASFEAKEGRLYSILVTGSARDGYQHNVIEVVALSTVSILWQLPQIVVMTAAEVMFS 648
                               |.:                            :||.:::...|.:..
plant   463 -------------------YLL----------------------------IPQYLIVGIGEALIY 480

  Fly   649 VTGLEFSYSQSPPSMKSVLQACWLLSVAIG---NMLVVVIAEFKFTSS---------QSGE---- 697
            ...|:|...:.|..||.:.....|.::|:|   :.::|.|.| |||..         ..|.    
plant   481 TGQLDFFLRECPKGMKGMSTGLLLSTLALGFFFSSVLVTIVE-KFTGKAHPWIADDLNKGRLYNF 544

  Fly   698 FTLFASLMLVDMMIFLWLARSYQYKDQR---EDFEDDDDATI 736
            :.|.|.|:.::.:|||..::.|.||::|   ...|.||:.:|
plant   545 YWLVAVLVALNFLIFLVFSKWYVYKEKRLAEVGIELDDEPSI 586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yinNP_001284844.1 2A1704 85..719 CDD:273343 142/722 (20%)
MFS 138..>398 CDD:304372 82/332 (25%)
NRT1.1NP_563899.1 MFS_NPF6 31..565 CDD:340971 148/734 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 120 1.000 Domainoid score I1880
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 222 1.000 Inparanoid score I1193
OMA 1 1.010 - - QHG55282
OrthoDB 1 1.010 - - D365203at2759
OrthoFinder 1 1.000 - - FOG0000101
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X63
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.980

Return to query results.
Submit another query.