DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment yin and Slc15a5

DIOPT Version :9

Sequence 1:NP_001284844.1 Gene:yin / 31340 FlyBaseID:FBgn0265575 Length:780 Species:Drosophila melanogaster
Sequence 2:NP_001178944.1 Gene:Slc15a5 / 502918 RGDID:1564925 Length:571 Species:Rattus norvegicus


Alignment Length:685 Identity:128/685 - (18%)
Similarity:220/685 - (32%) Gaps:259/685 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 EFCERFNYYGMRTILVLYLTNKLG-YNEETA--TVLFHTFTMLVYIFPLIGALIADGWLGKYKTI 141
            |.||||.::.:...::.:.|.:|| ||.:.|  .:.|...::|..:|  :|.|....:||:.|.:
  Rat    43 ELCERFTFFEVVCNMIPFCTRRLGCYNHQAAILNLCFIGASVLTPVF--MGWLSDSKYLGRNKLV 105

  Fly   142 LYLSLVYSLGAMVVSF----------GAVPLSGMPTK---AVTVVGLLLIAIGTGGIKPCVSAFG 193
            .....::.||..::|.          |..|.|.||.|   .:..|.||.:.:|||||:..|    
  Rat   106 YIAVFLHFLGTALLSVLAFPSEDFYGGTSPASNMPMKKRAGLFHVALLTLCLGTGGIRAVV---- 166

  Fly   194 GDQFSLP-------AQSFQLAKFFSLFYFAINAGSLISTTFTPILRADVHCFGDQDCFSLAFGVP 251
                .||       .:|.:...|.:...:::|            |...|...|......|..|..
  Rat   167 ----CLPDACGHWEQESKKPMSFCNWASWSMN------------LNTAVVFLGVSSIQLLGSGAV 215

  Fly   252 AILMIFSVIIFMAGKRLY------------RCQPPAGNMIFGVSRCIADAFKGWQKRRHSEPMES 304
            .||:. |:.:|.|...||            .|..|.      |||..|...|             
  Rat   216 MILLP-SLSVFTASVTLYMTYCDLIYEPENHCSLPT------VSRAFARVLK------------- 260

  Fly   305 FLDYAKPTVGSRMVQETKCLGRILRLFLPFPVFWALFDQQGSRWTFQATRMDGNVLGFQIKPDQM 369
                            |:||            .:....:.||.|..:|....| |...:::.::.
  Rat   261 ----------------TRCL------------LYCHLGRAGSSWLARAMAKQG-VCHCELQEEET 296

  Fly   370 QVVNPLLILGFLPLFDY-IIYPALARCGIRRPLQKLTLGLLLAALGFFLSAGLEMKMEQAAYRAT 433
            :.|...|    |.||.: :||   ..|..:.|            .|::|..              
  Rat   297 ENVFSAL----LSLFSFQLIY---RMCLTQIP------------SGYYLQT-------------- 328

  Fly   434 PIEPDMTHLRIYNGMPCRYEISSAVVQTPRVIEPLNVWEDLSLQMTESKEYTFNAQPVSGECPSI 498
                 |...|...|:|....:.:|:                                      |:
  Rat   329 -----MHSNRTLGGVPLPIALMNAI--------------------------------------SL 350

  Fly   499 IDKLRLQPGKSVSYFLAQDKLVEFADGLQMAATDTGRTSVRALLNTPDGEGPVLLSTESATSQEP 563
            :..|.|.|               |.|........:.|            :||.|           
  Rat   351 LPLLTLGP---------------FMDFFSNCLLPSKR------------DGPFL----------- 377

  Fly   564 PLTLDKGNVPQLHRI-TPGFARVDINGKKVASFEAKEGRLYSILVTGSARDGYQHNVIEVVALST 627
            .:.:..||:.....: ..||..:.   :|:|..::..|:|.|:                    |:
  Rat   378 SVCIIAGNICAAFSVAVAGFLEIH---RKLAQEQSPSGKLSSV--------------------SS 419

  Fly   628 VSILWQLPQIVVMTAAEVMFSVTGLEFSYSQSPPSMKSVLQACWLL-------SVAIGNMLVVVI 685
            ::.::.:||.|::..:||:.:......:....|.:.:.....|..|       :.|:...||.:|
  Rat   420 MACVYLVPQYVLLGVSEVLVNPAVSTVTRRVVPSTFRRASMTCLTLFHGSAYFAGALLIELVYLI 484

  Fly   686 AE---FKFTSSQ---SGEFTLFASLMLVDMMIFLW 714
            :|   |..|.::   ...|.:.|||.|:: ::.||
  Rat   485 SEGNWFPNTLNKGNLESFFFVLASLTLLN-ILGLW 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yinNP_001284844.1 2A1704 85..719 CDD:273343 124/680 (18%)
MFS 138..>398 CDD:304372 60/292 (21%)
Slc15a5NP_001178944.1 MFS 101..486 CDD:304372 100/590 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D365203at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X63
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.