DRSC/TRiP Functional Genomics Resources

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Protein Alignment yin and slc15a4

DIOPT Version :9

Sequence 1:NP_001284844.1 Gene:yin / 31340 FlyBaseID:FBgn0265575 Length:780 Species:Drosophila melanogaster
Sequence 2:NP_001307458.1 Gene:slc15a4 / 393932 ZFINID:ZDB-GENE-040426-1047 Length:578 Species:Danio rerio


Alignment Length:725 Identity:153/725 - (21%)
Similarity:258/725 - (35%) Gaps:266/725 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 AFIISNEFCERFNYYGMRTILVLYLTNKLGYNEET----ATVLFHTFTMLVYIFPLIGALIADGW 134
            |.|:..|..||..:||:.:.|||:|.:...|.|.|    ..::|...|.|:..|   |..:||.:
Zfish    34 AAILLAESLERMAFYGITSNLVLFLNSSPFYWEGTLASQGPLIFMGVTYLISPF---GGWLADAY 95

  Fly   135 LGKYKTILYLSL-VYSLGAMVVSFGA----------------------VPLSGMPTKAVTVV--- 173
            |||:.||. ||| :|.||.::..|.|                      .|.:|.....||.|   
Zfish    96 LGKFLTIA-LSLGLYLLGMLLFPFVASDNTRNYLCGEEMAFPVQPAECFPENGTVPANVTCVNRP 159

  Fly   174 ---------GLLLIAIGTGGIKPCVSAFGGDQFSLPAQSFQLAKFFSLFYFAINAGSLISTTFTP 229
                     ||:|:|:|.|.:|..::.||.||....... ...:||:.||:.||.|::.|.....
Zfish   160 SYCRPAIYSGLVLVALGVGAVKSNITPFGADQVKDRGPE-ATRRFFNWFYWCINLGAIFSLGGIA 223

  Fly   230 ILRADVHCFGDQDCFSLAFGVPAILMIFSVIIFMAGKRLYRCQPPAGNMIFGVSRCIADAFKGWQ 294
            .::.::       .||:.:.:||:.:..|:|||..||.::..:|..|:....:.|.:..|..|..
Zfish   224 YIQQNI-------SFSIGYIIPAVCLGVSLIIFFLGKAVFITKPADGSAFSDMFRILGSALCGRG 281

  Fly   295 KRRHS--EPMESFLDYAKPTVGSRM----VQETKCLGRILRLFLPFPVFWALFDQQGSRWTFQAT 353
            .:..|  .|..:.||.||.|.|.|.    |:|.|.|.:||.:||....:|.::.|..:.:..|:.
Zfish   282 PKEPSLLRPKPTVLDGAKVTYGGRFSDEKVEEVKSLVKILPVFLALIPYWTVYFQMQTTYYLQSL 346

  Fly   354 RM----------DGNVLGFQIKPDQMQVVNPLLILGFLPLFDYIIYPALARCG-IRRPLQKLTLG 407
            .:          |.:...|:.....:.:.:.:|||..:||.|.::.|.|.|.| :...|:::.:|
Zfish   347 HLTIPGADPNSTDSHPNTFRFPAAWLTMFDAVLILMLIPLKDKVVDPILKRKGLLPSSLKRIAVG 411

  Fly   408 LLLAALGFFLSAGLEMKMEQAAYRATPIEPDMTHLRIYNGMPCRYEISSAVVQTPRVIEPLNVWE 472
            :      ||:...                                .:::.:::|.|:        
Zfish   412 M------FFVMCS--------------------------------AVAAGILETKRL-------- 430

  Fly   473 DLSLQMTESKEYTFNAQPVSGECPSIIDKLRLQPGKSVSYFLAQDKLVEFADGLQMAATDTGRTS 537
                                                                       |..|| 
Zfish   431 -----------------------------------------------------------DIVRT- 435

  Fly   538 VRALLNTPDGEGPVLLSTESATSQEPPLTLDKGNVPQLHRITPGFARVDINGKKVASFEAKEGRL 602
                                           :|.:||           .:.|             
Zfish   436 -------------------------------RGPIPQ-----------SLGG------------- 445

  Fly   603 YSILVTGSARDGYQHNVIEVVALSTVSILWQLPQIVVMTAAEVMFSVTGLEFSYSQSPPSMKSVL 667
                            ||...|  .:.|.||:||.|::..:|:..|:.||||:||.:|.||:|.:
Zfish   446 ----------------VIYYAA--DLPIWWQVPQYVLIGVSEIFASIAGLEFAYSAAPRSMQSAI 492

  Fly   668 QACWLLSVAIGNML---VVVIAEFKFTSSQSGE--------------FTLFASLMLVDMMIFLWL 715
            ...:.....||:.:   ::.|...|.....|..              |.|.|::..:.::|||.:
Zfish   493 MGLFFFFSGIGSFVGSGLLAIVSLKAIGWMSSHQDFGNINECRLNYYFFLLAAIQGITLLIFLIV 557

  Fly   716 ARSYQYKDQR 725
              |.:|..|:
Zfish   558 --SVKYDKQK 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yinNP_001284844.1 2A1704 85..719 CDD:273343 145/706 (21%)
MFS 138..>398 CDD:304372 81/311 (26%)
slc15a4NP_001307458.1 MFS 158..522 CDD:304372 104/550 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55282
OrthoDB 1 1.010 - - D365203at2759
OrthoFinder 1 1.000 - - FOG0000101
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100318
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X63
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.830

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