DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment yin and ptr2

DIOPT Version :10

Sequence 1:NP_001284844.1 Gene:yin / 31340 FlyBaseID:FBgn0265575 Length:780 Species:Drosophila melanogaster
Sequence 2:NP_596417.1 Gene:ptr2 / 2540201 PomBaseID:SPBC13A2.04C Length:618 Species:Schizosaccharomyces pombe


Alignment Length:761 Identity:156/761 - (20%)
Similarity:260/761 - (34%) Gaps:294/761 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 IPYPKSVAFIISNEFCERFNYYGMRTILVLYL--------TNKLGYNEETATVLFHTFTMLVYIF 123
            ||:...:..|:  |.||||.|||:......|:        ...|...|..|..|.:.||...|:.
pombe    81 IPWKAFIIIIV--ELCERFAYYGLTVPFQNYMQFGPKDATPGALNLGESGADGLSNFFTFWCYVT 143

  Fly   124 PLIGALIADGWLGKYKTILYLSLVYSLGAMVVSFGAVP--LSGMPTKAVTVVGLLLIAIGTGGIK 186
            |:..|||||.:||:|.||:..:::|.:|.::::..|:|  :....:....||.|::|.:||||||
pombe   144 PVGAALIADQFLGRYNTIVCSAVIYFIGILILTCTAIPSVIDAGKSMGGFVVSLIIIGLGTGGIK 208

  Fly   187 PCVSAFGGDQFSLPAQSFQLAKF------------------------FSLFYFAINAGSL--IST 225
            ..||         |..:.||.|.                        :.:||::||.|||  ::|
pombe   209 SNVS---------PLMAEQLPKIPPYVKTKKNGSKVIVDPVVTTSRAYMIFYWSINVGSLSVLAT 264

  Fly   226 TFTPILRADVHCFGDQDCFSLAFGVPAILMIFSVIIFMAGKRLYRCQPPAGNMIFGVSRCIADAF 290
            |.....:.          |..|:.:|..:.:..:||....||.|:..||:|::...|.:..   |
pombe   265 TSLESTKG----------FVYAYLLPLCVFVIPLIILAVSKRFYKHTPPSGSIFVRVGQVF---F 316

  Fly   291 KGWQKRRHSEPMESFLDYAKP----TVG---------SRMVQETKCLGRILRLFLPFPVFWALFD 342
            ...|.:.:       |:..||    |||         ...:.|.|...|..:.||.:|::|..:.
pombe   317 LAAQNKFN-------LEKTKPSCTTTVGRVTLKDQWDDLFIDELKRALRACKTFLFYPIYWVCYG 374

  Fly   343 QQGSRWTFQATRMD-GNVLGFQIKPDQMQVVNPLLILGFLPLFDYIIYPALARCGIR-RPLQKLT 405
            |..:....||.:|. |||     ..|..|..:.:.::.|:|:.|.||||.|.:..|. :|:.::|
pombe   375 QMTNNLISQAGQMQTGNV-----SNDLFQAFDSIALIIFIPICDNIIYPLLRKYNIPFKPILRIT 434

  Fly   406 LGLLLAALGFFLSAGLEMKMEQAAYRATPIEPDMTHLRIYNGMPCRYEISSAVVQTPRVIEPLNV 470
            ||.:.|......:|.|:.|                   ||...||                    
pombe   435 LGFMFATASMIYAAVLQAK-------------------IYQRGPC-------------------- 460

  Fly   471 WEDLSLQMTESKEYTFNAQPVSGECPSIIDKLRLQPGKSVSYFLAQDKLVEFADGLQMAATDTGR 535
                                                                             
pombe   461 ----------------------------------------------------------------- 460

  Fly   536 TSVRALLNTPDGEGPVLLSTESATSQEPPLTLDKGNVPQLHRITPGFARVDINGKKVASFEAKEG 600
                                                                             
pombe   461 ----------------------------------------------------------------- 460

  Fly   601 RLYSILVTGSARDGYQHNVIEVVALSTVSILWQLPQIVVMTAAEVMFSVTGLEFSYSQSPPSMKS 665
              |:             |..:....:.:|:..|:|..|::..:|:..|:|||||:::::||||||
pombe   461 --YA-------------NFTDTCVSNDISVWIQIPAYVLIAFSEIFASITGLEFAFTKAPPSMKS 510

  Fly   666 VLQACWLLSVAIGNMLVVVIAEFKFTSSQSGEFTLFASLMLVDMMIFLWLARSYQYKDQRED--- 727
            ::.|.:|.:.|.|.:|.:.|:........:..:|..|....:..::| |:.  :.:.|..||   
pombe   511 IITALFLFTNAFGAILSICISSTAVNPKLTWMYTGIAVTAFIAGIMF-WVC--FHHYDAMEDEQN 572

  Fly   728 ---FEDDDDAT--------------IDSVMQSKPKATTVDTTARKT 756
               |:.:|..|              .|....:..|||..:...:.|
pombe   573 QLEFKRNDALTKKDVEKEVHDSYSMADESQYNLEKATAEEEIMKST 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yinNP_001284844.1 2A1704 85..719 CDD:273343 138/684 (20%)
ptr2NP_596417.1 MFS_PTR2 82..563 CDD:340908 144/703 (20%)

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