DRSC/TRiP Functional Genomics Resources

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Protein Alignment yin and Slc15a4

DIOPT Version :9

Sequence 1:NP_001284844.1 Gene:yin / 31340 FlyBaseID:FBgn0265575 Length:780 Species:Drosophila melanogaster
Sequence 2:NP_653359.1 Gene:Slc15a4 / 246280 RGDID:708469 Length:572 Species:Rattus norvegicus


Alignment Length:725 Identity:131/725 - (18%)
Similarity:234/725 - (32%) Gaps:264/725 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 IISNEFCERFNYYGMRTILVLYLTNKLGYNEE--TATVLFHTFTMLVYIFPLIGALIADGWLGKY 138
            ::..|..||..:||:...|||:| |...:|.|  .|:.....|..|.|:....|..:||..||:.
  Rat    31 VLLAELLERAAFYGVTANLVLFL-NGAPFNWEGAQASQALLLFMGLTYLGSPFGGWLADARLGRA 94

  Fly   139 KTILYLSLVYSLGAMVVSFGAVP-----LSGMP--------------------------TKAVTV 172
            :.||....:|.||.:.....|.|     |.|.|                          ....|.
  Rat    95 RAILLSLALYLLGMLAFPLLAAPRSRSFLCGDPHPELVRNCSAPFPNGTAVCPDAAARRCAPATF 159

  Fly   173 VGLLLIAIGTGGIKPCVSAFGGDQFSLPAQSFQLAKFFSLFYFAINAGSLISTTFTPILRADVHC 237
            .||:|:.:|...:|..::.||.||....... ...:||:.||::||.|:::|......::.:|  
  Rat   160 AGLVLVGLGVATVKANITPFGADQVKDRGPE-ATRRFFNWFYWSINLGAILSLGGIAYIQQNV-- 221

  Fly   238 FGDQDCFSLAFGVPAILMIFSVIIFMAGKRLYRCQPPAGNMIFGVSR-----CIADAFKGWQKRR 297
                 .|...:.:|.:.:..:.::|:.|:.::..:||.|:....:.|     |.:.  :|.|:|.
  Rat   222 -----SFLTGYLIPTVCVAIAFLVFLCGQSVFITKPPDGSAFTDMFRILTYSCCSQ--RGGQRRS 279

  Fly   298 -------HSEPMESFLDYAKPTVGSRM----VQETKCLGRILRLFLPFPVFWALFDQQGSRWTFQ 351
                   ......|..|..|.:.|...    |::.|.|.:|:.:||....:|.::.|..:.:..|
  Rat   280 GEGLGVFQQSSKHSLFDSCKMSRGGPFTEDKVEDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQ 344

  Fly   352 ATRM------DGNVLGFQIKPDQMQVVNPLLILGFLPLFDYIIYPALARCG-IRRPLQKLTLGLL 409
            :..:      ........:....:.:.:.:|||..:||.|.::.|.|.|.| :...|:::.:|:.
  Rat   345 SLHLKIPEISSITTTHHTLPAAWLTMFDAVLILLLIPLKDKLVDPVLRRHGLLPSSLKRIAVGMF 409

  Fly   410 LAALGFFLSAGLEMKMEQAAYRATPIEPDMTHLRIYNGMPCRYEISSAVVQTPRVIEPLNVWEDL 474
            ......|.:..||.|                                                  
  Rat   410 FVTCSAFAAGILESK-------------------------------------------------- 424

  Fly   475 SLQMTESKEYTFNAQPVSGECPSIIDKLRLQPGKSVSYFLAQDKLVEFADGLQMAATDTGRTSVR 539
              ::...||.|.| |.:.|                |.|..|.                       
  Rat   425 --RLDLVKEKTIN-QTIGG----------------VVYHAAD----------------------- 447

  Fly   540 ALLNTPDGEGPVLLSTESATSQEPPLTLDKGNVPQLHRITPGFARVDINGKKVASFEAKEGRLYS 604
                                                                             
  Rat   448 ----------------------------------------------------------------- 447

  Fly   605 ILVTGSARDGYQHNVIEVVALSTVSILWQLPQIVVMTAAEVMFSVTGLEFSYSQSPPSMKSVLQA 669
                                   :.|.||:||.|::..:|:..|:.||||:||.:|.||:|.:..
  Rat   448 -----------------------LPIWWQIPQYVLIGISEIFASIAGLEFAYSAAPKSMQSAIMG 489

  Fly   670 CWLLSVAIGN------MLVVVIAEFKFTSSQSG-----------EFTLFASLMLVDMMIFLWLAR 717
            .:.....||:      :.:|.:....:.||.:.           .|.|.|::....:::||.::.
  Rat   490 LFFFFSGIGSFVGSGLLALVSLKAIGWMSSHTDFGNINSCHLHYYFFLLAAIQGATLLLFLIVSV 554

  Fly   718 SYQYKDQRED 727
            .|..:..|.|
  Rat   555 KYDRQRARTD 564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yinNP_001284844.1 2A1704 85..719 CDD:273343 125/706 (18%)
MFS 138..>398 CDD:304372 64/313 (20%)
Slc15a4NP_653359.1 MFS_SLC15A3_4 25..555 CDD:340906 128/714 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55282
OrthoDB 1 1.010 - - D365203at2759
OrthoFinder 1 1.000 - - FOG0000101
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100318
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X63
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.830

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