DRSC/TRiP Functional Genomics Resources

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Protein Alignment yin and slc15a4

DIOPT Version :9

Sequence 1:NP_001284844.1 Gene:yin / 31340 FlyBaseID:FBgn0265575 Length:780 Species:Drosophila melanogaster
Sequence 2:XP_002935336.2 Gene:slc15a4 / 100491217 XenbaseID:XB-GENE-986485 Length:570 Species:Xenopus tropicalis


Alignment Length:750 Identity:142/750 - (18%)
Similarity:272/750 - (36%) Gaps:284/750 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 GFETPPIPYPKSV--------AFIISNEFCERFNYYGMRTILVLYLTNKL----GYNEETATVLF 113
            |...||:| |.||        |.::.:|..||..:||:.:.|||:|..::    |.....|.:||
 Frog    15 GRSEPPVP-PGSVFAGRGLACAAVLLSELLERVAFYGITSNLVLFLNGQIFGWEGTQASQALLLF 78

  Fly   114 HTFTMLVYIFPLIGALIADGWLGKYKTILYLSLVYSLGAM---VVSF--------GAVP------ 161
            ...|.||  .|..|.| ||..||::..||...::|.||.:   ::|:        |.:|      
 Frog    79 MGITYLV--SPFAGWL-ADALLGRFFIILGSMVLYLLGMLLFPMISYSGTRTAFCGDIPWARIDN 140

  Fly   162 -----LSGMPTKAV----------TVVGLLLIAIGTGGIKPCVSAFGGDQFSLPAQSFQLAKFFS 211
                 .|..|...:          ..:||:::.:|.|.:|..::.||.||....... ...:||:
 Frog   141 CSRSNTSSSPDTCLDPSRRYCAPAVFLGLIIVGLGVGSVKANITPFGADQVKDRGPE-ATRRFFN 204

  Fly   212 LFYFAINAGSLISTTFTPILRADVHCFGDQDCFSLAFGVPAILMIFSVIIFMAGKRLYRCQPPAG 276
            .||::||.|::||......::.:|.       |...:.:|.:.:..|.::|:.||.::..:|..|
 Frog   205 WFYWSINLGAIISLGGIAYVQQNVD-------FLTGYIIPTVCIGVSFLVFLCGKTVFVTKPADG 262

  Fly   277 NMIFGVSRCIADAFKGWQKRRHS---------EPMESFLDYAKPTVGSRM----VQETKCLGRIL 328
            :....:.:.:|.:....:.||.:         ...:|.||:||.:.|...    |::.|.|.:|:
 Frog   263 SAFTDMVKILAYSCCARKHRRENTRHVQNNQQRHKQSRLDFAKASRGGPFREDKVEDVKSLVKII 327

  Fly   329 RLFLPFPVFWALFDQQGSRWTFQATRMDGNVLGFQIKP----------DQMQVVNPLLILGFLPL 383
            .:||....:|.::.|..:.:..|:       |..:|.|          ..:.:.:.:|||..:||
 Frog   328 PVFLALIPYWTVYFQMQTTYVLQS-------LHLKIPPIFNNNHTLPAAWLTMFDAVLILILIPL 385

  Fly   384 FDYIIYPALARCG-IRRPLQKLTLGLLLAALGFFLSAGLEMKMEQAAYRATPIEPDMTHLRIYNG 447
            .|.::.|.|.:.| :..||:::.:|:      ||:...:                          
 Frog   386 KDKMVDPFLKKRGLLPSPLKRIAVGM------FFVMCSV-------------------------- 418

  Fly   448 MPCRYEISSAVVQTPRVIEPLNVWEDLSLQMTESKEYTFNAQPVSGECPSIIDKLRLQPGKSVSY 512
                  :::.::::.|            |::.::                  ||::.|.| .|:|
 Frog   419 ------LAAGILESKR------------LEIVKN------------------DKIQQQIG-GVTY 446

  Fly   513 FLAQDKLVEFADGLQMAATDTGRTSVRALLNTPDGEGPVLLSTESATSQEPPLTLDKGNVPQLHR 577
            :.|                                                              
 Frog   447 YAA-------------------------------------------------------------- 449

  Fly   578 ITPGFARVDINGKKVASFEAKEGRLYSILVTGSARDGYQHNVIEVVALSTVSILWQLPQIVVMTA 642
                                                             .:::.|||||.:::..
 Frog   450 -------------------------------------------------NLAVWWQLPQYILIGI 465

  Fly   643 AEVMFSVTGLEFSYSQSPPSMKSVLQACWLLSVAIGN------MLVVVIAEFKFTSSQSG----- 696
            :|:..|:.||||:||.:|.||:|.:...:.....||:      :.:|.|.:..:.|:.|.     
 Frog   466 SEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGIGSFVGSGLLALVSIPQIGWMSNHSDLGNIN 530

  Fly   697 ------EFTLFASLMLVDMMIFLWLARSYQYKDQR 725
                  .|.|.|::....:::||.::..|:.:..|
 Frog   531 GCTLNYYFFLLAAVQAATLILFLIISVKYERQQSR 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yinNP_001284844.1 2A1704 85..719 CDD:273343 129/710 (18%)
MFS 138..>398 CDD:304372 67/315 (21%)
slc15a4XP_002935336.2 MFS_SLC15A3_4 31..558 CDD:340906 133/724 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55282
OrthoDB 1 1.010 - - D365203at2759
OrthoFinder 1 1.000 - - FOG0000101
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X63
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.930

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