DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ec and Usp53

DIOPT Version :9

Sequence 1:NP_001096877.1 Gene:ec / 31339 FlyBaseID:FBgn0000542 Length:1765 Species:Drosophila melanogaster
Sequence 2:XP_011238615.1 Gene:Usp53 / 99526 MGIID:2139607 Length:1096 Species:Mus musculus


Alignment Length:1097 Identity:270/1097 - (24%)
Similarity:407/1097 - (37%) Gaps:374/1097 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 GHINSAGNSERDRCINAVIE-LFQQLQTSSEPALCPEPLRRALASGPLAGRRFPLGCLGDAAECF 188
            |||     .:.|.||...:: :|.|.|.|.|.||..:.:|.|||......:||.||.:.||||||
Mouse    65 GHI-----CQGDACIFCALKTIFAQFQHSREKALPSDNIRHALAESFKDEQRFQLGLMDDAAECF 124

  Fly   189 ELLLHRVHSHISPD-DGDSCESSACIAHRRFAMR---------------------------VIEQ 225
            |.:|.|:|.|:.|: |.|.|.|.:|:.|::|||.                           |:.|
Mouse   125 ENILARIHFHLVPNRDADMCTSKSCVTHQKFAMTLYEQVRCLGCLCRHWTAVSGAMDSAACVLPQ 189

  Fly   226 SVCK-CGANSEQLPFTQMVHYVSASALTSQKSLALQSHQQLS---FGQLLRAAGNMGDIRDCPNT 286
            .||: |||:|:.||||::|.|:|.:||.::....::.|:::.   |.:||:||....|.|.||:.
Mouse   190 CVCRSCGASSDPLPFTELVRYISTTALCNEVERMMERHERVKPEMFAELLQAANTADDYRKCPSN 254

  Fly   287 CGAKIGICRALLNRPEVVSIGIVWDSERPAADQVHAVLKAVGTSLRLGDVFHQVSEPRWAQQTQH 351
            ||.||.|.|.|:|.||:|:||:|||||.  :|....|::::.|.|.|..:|::|::.. |..::.
Mouse   255 CGQKIKIRRVLMNCPEIVTIGLVWDSEH--SDLTEDVVRSLATHLYLPGLFYRVTDEN-ATDSEL 316

  Fly   352 ELVGIVSYYGKHYTTFFFHTKLKVWVYFDDANVKEVGPSWEGVVDKCSRGRYQPLLLLYAVPQQP 416
            .|||::.|..:||..|.||||...||:||||:|||:|..|:.||.||.|...|||||.||.|...
Mouse   317 HLVGMICYTSRHYCAFAFHTKSSKWVFFDDAHVKEMGTRWKDVVSKCIRCHLQPLLLFYANPDGT 381

  Fly   417 TVG------------------NGVGIGHVDVAMPASAP--SIAGSVVRRA-------VTPSPEKP 454
            .|.                  ..:|.|...:..|.::.  ...|...::.       ::......
Mouse   382 AVSTEDALRQVVHWSHYRSGEENMGCGKPIIYKPDNSKENGFGGQTKQKENHKFQTDISSLNRSQ 446

  Fly   455 SLGNTRRAITPTPLRTPPNDYQNL----------SVIQKNIFPS---NLAMG-----------TD 495
            ...:.|||    |::...:..:.:          ::.|||...|   :|..|           .|
Mouse   447 MQTSGRRA----PVKLSHDQREKIKDISRECALKAIEQKNALSSQRKDLEKGQRKDTGRHRDLVD 507

  Fly   496 ET---------------------------------------DAYISRKTVEHVLSAQYQNLSVIQ 521
            |.                                       ::|.|.|.:.   |::.|||.|..
Mouse   508 EVLASFKSGSPPASDGFRQQGNPHLYHSQGKGPCKHDRATHESYTSGKVIS---SSKSQNLLVPG 569

  Fly   522 DKIGG----GNGVGV----GQQSVDKDGGFLSR--------KPIEAVLS-----AQLARRQHLQL 565
            :|..|    .:|.|.    .|.|.||.|.:.|:        ||:...|:     ::..:|||...
Mouse   570 EKTTGKAKSDSGTGYETDSSQDSRDKGGSYSSKTKSRHRGWKPMRETLNVDSVFSESEKRQHSPR 634

  Fly   566 QRS------------------------------------------HSAESSSGHASSNGSSPPSD 588
            ::|                                          .|.|::...|..|.|:..|.
Mouse   635 RKSDIGSRPRCSKDQSFNNWPKANPKQKGLMTIYEDEMKQEAGSRSSLETNGKGAEKNLSAAESR 699

  Fly   589 GLTMPEHLNQPRRRDSGNWSGDRNSASSASSTTLDNPYLYMVAKRGVAAVPQSPTRHGLPYDPG- 652
            |   |....|.:|.:||..|.|..|..|||   ||:|        ||..       .|...|.| 
Mouse   700 G---PGTSWQMQRTESGYESSDHVSNGSAS---LDSP--------GVEG-------SGAVMDVGG 743

  Fly   653 ---------YDSFSLSSTDSYPPKHALNPQLAKIPEAAMGVVPNGGAMPHGHGNGQLALSGDCEK 708
                     .:|.::.|.: |...|..:                   .|.|.......|..| :|
Mouse   744 GKAFSEHIKMNSHNMDSME-YISHHCKD-------------------HPEGFRKELQDLEAD-DK 787

  Fly   709 L--CHEADQLLEKSRLVEESHDLETALVLCNAAAGRARAAMDAPYSNPHTM-----TFARMKHNT 766
            :  .|....:..||.|::.|...||...|..:|:.:..|......:|.|.:     :....:|||
Mouse   788 IHELHPESHVQIKSHLIKRSQIGETNDKLFPSASPQTLAREHVYQTNEHKVERPDRSKCSERHNT 852

  Fly   767 CVMRARSLHRRILVEKGAETEAMPELKHMREGSTSSVKHVRQN---------SKDRT--LEKEQQ 820
                           :.:|...:|  .|:.|.|.:. |.|..|         |..||  |:.|..
Mouse   853 ---------------ENSEGTGLP--FHVDESSVAG-KRVDSNETVSPSSLPSSVRTAGLKPETG 899

  Fly   821 QLQFQQIQ---------------------------QIQQIHQIQQQIPASIEIYAT--------- 849
            .|.|...|                           |:.::|..:...|...:.|:|         
Mouse   900 PLMFWSQQNITEQGYSDNSLSRELTLLSACNADSCQMPKLHCHRSPPPLPPKKYSTASAPRLERV 964

  Fly   850 ------------------LPKRK-SPLKALA-SASAC--DDNAIEYEQEKQLA---------TSP 883
                              |||.. ||....: ..|.|  .:...|..|.||||         |:.
Mouse   965 GLSPDVGVTEAFNTNPSSLPKHSLSPASGPSLEGSPCMTQERDKETIQVKQLAANSYPSSCSTNS 1029

  Fly   884 GKPERESRSLFGRKDKEKEKRSRSEDRNKLTREFSLTETLLVNAKDT--LKKHKEDK 938
            .:|:::|.|:.            ..:...||..||:...:    .||  ||.|:..|
Mouse  1030 FQPDQDSTSVC------------PNETISLTTYFSVDSCM----TDTYRLKYHQRPK 1070

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ecNP_001096877.1 Peptidase_C19 183..410 CDD:239072 106/258 (41%)
Usp53XP_011238615.1 UCH 30..375 CDD:366104 127/317 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 278 1.000 Domainoid score I1696
eggNOG 1 0.900 - - E1_KOG1887
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S6196
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002086
OrthoInspector 1 1.000 - - otm43994
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR22975
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5015
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
98.850

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