DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ec and usp54a

DIOPT Version :9

Sequence 1:NP_001096877.1 Gene:ec / 31339 FlyBaseID:FBgn0000542 Length:1765 Species:Drosophila melanogaster
Sequence 2:NP_001314804.1 Gene:usp54a / 563912 ZFINID:ZDB-GENE-090828-2 Length:1497 Species:Danio rerio


Alignment Length:1783 Identity:387/1783 - (21%)
Similarity:641/1783 - (35%) Gaps:524/1783 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 DRCINAVIE-LFQQLQTSSEPALCPEPLRRALASGPLAGRRFPLGCLGDAAECFELLLHRVHSHI 199
            |.||...:: :|.|.|.|||..|..:.||.|||......:||.||.:.|||||||.:|.|:|.||
Zfish    72 DSCIFCALKSIFAQFQFSSEKVLPSDALRCALAKTFQDEQRFQLGIMDDAAECFENILMRIHFHI 136

  Fly   200 SPD-DGDSCESSACIAHRRFAMRVIEQSVC-KCGANSEQLPFTQMVHYVSASALTSQKSLALQSH 262
            |.: ..|.|.:..||.|::|||.:.||.|| .|||:|:.|||.|||||:|.::|.:|....|:..
Zfish   137 SDETKEDICTAKHCIPHQKFAMTLFEQCVCSNCGASSDPLPFIQMVHYISTTSLCNQAVRMLECR 201

  Fly   263 QQLS---FGQLLRAAGNMGDIRDCPNTCGAKIGICRALLNRPEVVSIGIVWDSERPAADQVHAVL 324
            ::.:   ||:|||.|..:||:|:||..||.|:.|.|.|:|.||:::||:||||:.  :|....|:
Zfish   202 EKPTPDMFGELLRNASTVGDLRNCPGNCGEKLRIRRVLMNSPEIITIGLVWDSDH--SDLAEDVI 264

  Fly   325 KAVGTSLRLGDVFHQVSEPRWAQQTQHELVGIVSYYGKHYTTFFFHTKLKVWVYFDDANVKEVGP 389
            .::||.|||||:|::|:|.: |:|.:..|||:|.||||||:||||.||::.|:|||||:|||:||
Zfish   265 HSLGTVLRLGDLFYRVTEDK-AKQAELYLVGVVCYYGKHYSTFFFQTKIRKWIYFDDAHVKEIGP 328

  Fly   390 SWEGVVDKCSRGRYQPLLLLYAVPQQPTVGNGVGIGHVDVAMPASAPSIAGSVVRRAVT------ 448
            .|:.||.:|.:|.|||||||||.|:               ..|.||..:|..:.....|      
Zfish   329 KWKDVVSRCIKGHYQPLLLLYADPR---------------GTPVSAQDLASRLDLHHYTKAYYDS 378

  Fly   449 -PSPEKPSLGNTRRAITPTPLRTPPNDYQNLSVIQKNIFPSNLAMGT------DETDAYISRKTV 506
             .|..:||:.:..|..:.|...:..:.:.:...:..:.  |:.:.||      :::.::.|.:| 
Zfish   379 EDSGREPSISSDTRTDSSTDSYSYKHSHSHHESMASHF--SSDSQGTVICNPDNDSASHSSLET- 440

  Fly   507 EHVLSAQYQNLSVIQDKIGGGNGVGVGQQSVDKDGGFLSRK--------------------PIEA 551
                :....:...:|......:||      :|:..|.|.||                    ..:.
Zfish   441 ----TGPLTDSDTVQRHTLRKDGV------LDRKAGVLDRKRSASRPRKFEARGDSRNRVSKTDE 495

  Fly   552 VLSA------QLARRQHLQLQRSHSAESSSG-----------------HASSNGSSPPSDGLTMP 593
            ||||      :..:.|  |:.||....|||.                 .|||:||..|.|...  
Zfish   496 VLSAGYHSEGETLKEQ--QVPRSLPKPSSSRLRDFKETMSNIIHNRPLSASSSGSVCPPDSTI-- 556

  Fly   594 EHLNQPRRRDSGNWSGDRNSASSASSTTLDNPYLYMVAKRGVAAVPQSPTRHGLPYD-------- 650
                  :.||   |..|..|:.|.||::           .|....|..|.|..|..|        
Zfish   557 ------KVRD---WEADSTSSESKSSSS-----------GGRYRPPWKPRREALNIDSIFSRERR 601

  Fly   651 --PGYDSF-SLSSTDSYPPKHALNPQ---LAKIPEAAMGVVPNGGAMPHGHGNGQLALSGDCEKL 709
              .||... :|.|.|:.|....::.:   ...||    |.:..|...|              .:|
Zfish   602 KQAGYSPLGALLSEDTGPQVGLMSTKQITFQDIP----GPLRRGSEQP--------------PRL 648

  Fly   710 CHEADQLLEKSRLVEESH---DLETALVLCNAAAGRARAAM--DAPYSNPHTMTFARMKHNTCVM 769
            ....:...|.|.....|.   |:..:....|........||  ..|..||...|..:.|.::.::
Zfish   649 IQRMESGYESSERNSNSPVSLDMPVSEATTNGMHSLQEGAMIKPPPDVNPSWKTVTKSKSSSALL 713

  Fly   770 R------ARSLHRRILVEKGAETEAMPELKHMREGSTSSVKHVRQNSKDRTLEKEQQQL------ 822
            :      ..|.|..:..|..:|.:.:.|         ...:..|:....|..|||::..      
Zfish   714 QDVKASVKGSSHTSLAGEGRSELDELQE---------EVARRAREQELQRRKEKEKEAAMGFNPR 769

  Fly   823 --QFQQIQQIQQ----------IHQIQQQIPASIEIYATLPKRKSPLKALASASACDD--NAIEY 873
              :|..:.::|.          :.:.:..:..|:.:       :...:..|:.|..::  :.:.:
Zfish   770 PSKFMDLDELQNQGKGEGFERCVLEAESLLDQSLRL-------EQAGEVAAALSVVNEAMSKLRH 827

  Fly   874 EQEKQLATSPGKPE---RESRSLFGRKDKEKEKRSRSEDRNKLTREFSLTETLLVNAKDTLKKHK 935
            ...:..|.:.|:.:   |.:|.|..|. ::|::....|.:..|:.:....:.||.|.|       
Zfish   828 TLHESSANAQGRMQKCMRRARGLQQRM-QQKQQEEEKEQKQPLSEQSVPVQILLTNVK------- 884

  Fly   936 EDKDEKKEKDKSGKKQHKIRRKLLMGGLIRRKNRSMPDLTEAVDDSTANAGITHHPHYPAQGVTT 1000
             ::|||...:.:.:....:.        |:.::.|.| ::|           |..|..|:....|
Zfish   885 -EEDEKAISEDALRPPSPLH--------IKPQSTSKP-ISE-----------TPGPPVPSYHTDT 928

  Fly  1001 AGTLLGTSVDDSAVGLGKHGHGMSGYISEGHFDYSGSGSASNSGAGSNPNPNLE----RSKLMRK 1061
            ......|....|::.:.::..|....:                   .|.|..::    ||.....
Zfish   929 CSQKDNTGDHPSSLDVTENDRGPRDLV-------------------INTNSLVQTASKRSPATVP 974

  Fly  1062 SFHGSGRQLTMVPKVAPPPPMRTSSTLTPQQQQQQQQQFHHEANLSNLSAMSSNTSISE--DSCQ 1124
            ....:|.:.::...|:...|...|:.|||....      |.|..|.|.....|...:|:  .:||
Zfish   975 VIAANGCEASLQSSVSLNTPAYFSARLTPSTTD------HSEEGLQNPHRPQSLHGLSQAPHACQ 1033

  Fly  1125 TIITTCAQ---VHSEQSPLKDLQMLVAQDELPLPPPMELPPYPSPPHSS---CHSRQASEDFPPP 1183
            ..:...::   ..|.:.|  |.:.......:..|..:..|..|.||..|   ...|.|.     |
Zfish  1034 KSLPVPSRNWSCRSLERP--DSRPTTLDSSMYSPVDLSSPSSPCPPFLSSPVLEQRPAG-----P 1091

  Fly  1184 PPPELDLEPLNQQLSQLQALEAASKQQRQQLESLEGTTSILAQLQQRQHLLKLRKEQANHPGAAT 1248
            .|.|...|.:|:..:..:...:......::|..|                               
Zfish  1092 MPVERWAENVNRYYNSQKCARSGRDSPCEELSEL------------------------------- 1125

  Fly  1249 TDATWLKELQAKQANDLRAMQRKLEASSPSSVRDLTHRFEQTSIRSYASQELLSQPGQSQQLGQL 1313
             |:.:...|:|.      ::.|....:||    .|.:|......|.:::       |.|..||:.
Zfish  1126 -DSLYQASLKAP------SIPRATRGTSP----QLANRSGPAVSRKHST-------GSSATLGRS 1172

  Fly  1314 RTQMNGLPNGNAKMDVDEVDAMPAVRNSLPAALSAHQLLPKPKYEMTQSQIAEEIREV--ELLNT 1376
            :|     |....:................|.:.:|:.   :|..| .:|..||.:|.:  .|..|
Zfish  1173 KT-----PTAEIERSAYRTPTYSTKPLQKPVSAAAYN---EPLGE-DESYSAENLRRIARSLSGT 1228

  Fly  1377 MVQQTLNQNGAAALPKRVKKKSVSFCDQVILVATAGNEEDDDFIPNPILERVLRTAQHPN----- 1436
            :|      .|...:|     .|.||                    :|   .|.|.::|.|     
Zfish  1229 VV------GGRTDVP-----PSRSF--------------------DP---HVSRMSKHVNVQLPT 1259

  Fly  1437 --EKVTAQMIQQQQQNMMRLQTEAQPRQQQVQQLQQPSPM----------LGRPAGATADMQRYV 1489
              ...:..::.....|......|..|  |.:....:|.|:          |..|.|.|.|.|:..
Zfish  1260 HRSSTSLHVLPLPSHNPPMFPHEPPP--QHLHSSHRPHPVPTSSHLHQQTLRPPHGQTGDCQKTN 1322

  Fly  1490 QRMQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHQELYRQQQLHRTSMSGIASQQHLQQLD 1554
            :.:....:                              .|.:.::..|..::|            
Zfish  1323 KFLAVLDR------------------------------GEAFSRENYHNVALS------------ 1345

  Fly  1555 AQYTTMPR----------PLHHSQLGS---------YSVTLQKHQQLQQQQQQQQQQQAPQQLSL 1600
              |.|:||          |::..:.||         |:...:.|           :..||.:...
Zfish  1346 --YGTLPRAPRRSVSSGPPVYQMRPGSLPRNHPDAAYATLSRPH-----------RTTAPSRTMD 1397

  Fly  1601 GYFSNGSVATSEQVPLPSPYQRVPLPHGYQPAAAGPYYPLPNAQQHLQQQQLMAKPVQKKVSFEP 1665
            |::         :.|...|....|:||              ::.:|....:...:|::..|..|.
Zfish  1398 GFY---------RQPHQHPSLTAPIPH--------------HSSRHHPHTEPPTQPLRLDVPPER 1439

  Fly  1666 GTKGEADCLPPPPPPPQKNGLPETGSAGSGHPGAAPGASGAGGTTSAGITAIPTRVYNNAIVKAS 1730
            ..:...|....|...|:       |....|||                       ||        
Zfish  1440 DWRAARDTHVFPRTDPR-------GGTSRGHP-----------------------VY-------- 1466

  Fly  1731 AKAVECNLCRKRHVIAPAVYCTNCEYYL 1758
                .|.||::........||..|..::
Zfish  1467 ----ICGLCKQNPAEPTRSYCQACRAHM 1490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ecNP_001096877.1 Peptidase_C19 183..410 CDD:239072 119/231 (52%)
usp54aNP_001314804.1 UCH 32..330 CDD:306860 127/260 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 276 1.000 Domainoid score I1707
eggNOG 1 0.900 - - E1_KOG1887
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002086
OrthoInspector 1 1.000 - - otm25235
orthoMCL 1 0.900 - - OOG6_104646
Panther 1 1.100 - - O PTHR22975
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5015
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
87.890

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