DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ec and usp53b

DIOPT Version :9

Sequence 1:NP_001096877.1 Gene:ec / 31339 FlyBaseID:FBgn0000542 Length:1765 Species:Drosophila melanogaster
Sequence 2:XP_005171014.1 Gene:usp53b / 100537347 ZFINID:ZDB-GENE-090312-168 Length:1029 Species:Danio rerio


Alignment Length:1238 Identity:293/1238 - (23%)
Similarity:454/1238 - (36%) Gaps:400/1238 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 DRCINAVIE-LFQQLQTSSEPALCPEPLRRALASGPLAGRRFPLGCLGDAAECFELLLHRVHSHI 199
            |.||...:: :|.|.|.|.|.||..:.||.|||......:||.||.:.|||||||.:|.|:|.|:
Zfish    82 DACIFCALKSIFCQFQQSRERALPSDTLRHALAETFKDEQRFQLGLMDDAAECFENILERIHLHL 146

  Fly   200 SPDDG-DSCESSACIAHRRFAMRVIEQSVCK-CGANSEQLPFTQMVHYVSASALTSQKSLALQSH 262
            ..|.. ::|.|.:||.|::|||.:.||.||: |||:|:.||||::|||||::||..|....|:..
Zfish   147 VSDSATETCTSKSCITHQKFAMTLYEQFVCRSCGASSDPLPFTELVHYVSSTALCQQVERILEKT 211

  Fly   263 QQL---SFGQLLRAAGNMGDIRDCPNTCGAKIGICRALLNRPEVVSIGIVWDSERPAADQVHAVL 324
            .:|   .||:||:||..:||:|:||:.||..|.|.|.|:|.||:|:||.|||:|:  :|....|:
Zfish   212 DRLRSDMFGELLQAANTIGDLRNCPSNCGQSIKIRRVLMNCPEIVTIGFVWDAEQ--SDLTEDVI 274

  Fly   325 KAVGTSLRLGDVFHQVSEPRWAQQTQHELVGIVSYYGKHYTTFFFHTKLKVWVYFDDANVKEVGP 389
            :.:|.:|.|..:|::|::....::..| |||::.|..:||..|.||:|...|::||||.|||:|.
Zfish   275 RCLGPNLNLSGLFYRVTDENAKKRDLH-LVGMICYSSRHYLAFAFHSKSSKWIFFDDATVKEIGS 338

  Fly   390 SWEGVVDKCSRGRYQPLLLLYAVPQQPTVGNGVGIGHVDVAMPASAPSIAGSVVRRAVTPSPEKP 454
            .|:.|..||.||.:|||||.||.|      :|..:.:.|                     :|.:.
Zfish   339 KWKDVASKCIRGHFQPLLLFYANP------DGTAVSNED---------------------APRQT 376

  Fly   455 SLGNTRRAITPTPLRTPPNDYQNLSVIQKNIFPSNLAMGTDETDAYISRKTVEHVLSAQYQNLSV 519
            ::.:...    :||.....|.| ||..:|                                 |..
Zfish   377 TMWSRYN----SPLNGKGTDTQ-LSGCKK---------------------------------LDS 403

  Fly   520 IQDKIGGGNGVGVGQQSVDKDGGFLSRKPIEAVLSAQLARRQHLQLQRSHSAESSS--GHASSNG 582
            ::|...|......|..          :.|:::..|    |.:.|....|...|||.  .|....|
Zfish   404 VRDASAGSQRTNQGSH----------KTPMQSSTS----RLKVLPESPSRFRESSRDLSHRGGGG 454

  Fly   583 SSPPSDGLTMPEHLNQPRRRDSGNWSGDRNSASSASSTTLDNPYLYMVAKRGVAAVPQSPTRHGL 647
                             :||:|     ||                                    
Zfish   455 -----------------QRRES-----DR------------------------------------ 461

  Fly   648 PYDPGYDSFSLSSTDSYPPKHALNPQLAKIPEAAMGVVPNGGAMPHGHGNGQLALSGDCEKLCHE 712
                     |...:||:..|....|:|:..||       ||   |..|          ||:    
Zfish   462 ---------SYRRSDSFQHKDMTYPRLSSPPE-------NG---PRFH----------CEQ---- 493

  Fly   713 ADQLLEKSRLVEESHDLETALVLCNAAAGRARAAMDAPYSNPHTM--TFARMKHNTCVMRARSLH 775
                                                    .|.|:  ..:|.:|:       |:|
Zfish   494 ----------------------------------------RPRTLPSRVSRTEHS-------SVH 511

  Fly   776 RRILVEKGAETEAMPELKHMREGSTSSVKHVRQNSKDRTLEKEQQQLQFQQIQQIQQIHQIQQQI 840
            .|:..::....:.|.. ...|...:||:.|  :.|.:.| |:.:.:..::.::::..:..:..: 
Zfish   512 PRVSPQESRSNQGMAS-GVSRHADSSSLSH--RGSTNPT-ERGKSKPSWRPVREVLNVDSVLSE- 571

  Fly   841 PASIEIYATLPKRKSPLKALASASACDDNAIEYEQEKQLATSPGKPERESRSLFGR---KDKEKE 902
                                          :|..|::|.....|.|....|....|   |||:|.
Zfish   572 ------------------------------LERRQQQQQQQQRGSPRCVRRFAHERGLMKDKQKG 606

  Fly   903 KRSRSEDRNKLTREFSLTETLLVNAKDTLKKHKEDKDEKKEKDKSGKKQHKIRRKLLMGGLIRRK 967
            ..:..||.::|..|                         .:..:..::|..:.|......:.:|.
Zfish   607 LMTIYEDDSRLETE-------------------------SQSSQESQRQMMVTRSKGGANVAQRS 646

  Fly   968 NRSMPDLTEAVDDST--ANAGITHHPHYP---------------AQGVTTAGTLLGTSVDDSAVG 1015
            :..:...||:..:|:  .::|.| :|..|               ||.:...|   ..:.|||.:.
Zfish   647 DNWVIQRTESGYESSDRLSSGST-NPDSPGVENFTGKELRLSQDAQHLRDQG---HNNQDDSKME 707

  Fly  1016 L-------GKHGHGMSGYISEGHFDYSGSGSASN----SGAGSNPNPNLERSKLMRKSFHGSGRQ 1069
            .       |||...:.|..|| |. ..||.|:..    |..|:....|.|:..        ||..
Zfish   708 AARSPLYHGKHLAKIQGKNSE-HL-MKGSPSSRRKLRYSSCGTRKAGNTEKDP--------SGVD 762

  Fly  1070 LTMVPKVAPPPPMRTSSTLTPQQQQQQQQQFHHEAN---LSNLSAMSSNTSISEDSCQTIITTCA 1131
            |                   |.:||:...|:||...   |..|..:||:...|.|.....::   
Zfish   763 L-------------------PPEQQELSMQWHHSPESPLLRRLGKISSSECNSSDELTNPLS--- 805

  Fly  1132 QVHSEQSPLKDLQMLVAQDELPLPP----PMELPPYPSPPHSSCHSRQAS---EDFPPPPPPELD 1189
              ..|.|..:.....||..|.|.|.    |.|.....|.|..:.||:.|.   |...||..|.:.
Zfish   806 --EQEDSAYRSSTSEVAPHESPGPNRSSYPWEESAIQSGPSIASHSKHAQRPIEIKTPPFRPRIL 868

  Fly  1190 LEPLNQQLSQLQALEAASKQQ----RQQLESLEGTTSILAQLQQRQHLLKLRKEQAN-------- 1242
            .|| :|..|:.....|.|...    .:::| :.||....:.:..:....:.|.||.:        
Zfish   869 QEP-SQTASRASGRGAPSSSHSGAVHRRME-INGTCPSSSDVSSKSGSDQERGEQVSSEPEGWDK 931

  Fly  1243 -----HPGAATTDATWLKELQAKQANDLRAM---QRKLEASSP------SSVRDLTH--RFEQTS 1291
                 .||:.....|:. .:.....:..|..   ||.|..|.|      ...||..|  |.|..|
Zfish   932 PSSSVSPGSGVALTTYF-SVDNCMTDTYRLKYHHQRPLVLSMPEPRGAGKDGRDAGHSSRMENQS 995

  Fly  1292 IRS 1294
            .|:
Zfish   996 ERA 998

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ecNP_001096877.1 Peptidase_C19 183..410 CDD:239072 107/231 (46%)
usp53bXP_005171014.1 Peptidase_C19 41..>186 CDD:271592 47/103 (46%)
UCH 42..359 CDD:278850 126/279 (45%)
Peptidase_C19 130..359 CDD:239072 107/231 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 276 1.000 Domainoid score I1707
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002086
OrthoInspector 1 1.000 - - otm25235
orthoMCL 1 0.900 - - OOG6_104646
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5015
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.840

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