DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ec and usp54b

DIOPT Version :9

Sequence 1:NP_001096877.1 Gene:ec / 31339 FlyBaseID:FBgn0000542 Length:1765 Species:Drosophila melanogaster
Sequence 2:XP_009305019.1 Gene:usp54b / 100535699 ZFINID:ZDB-GENE-090828-3 Length:1322 Species:Danio rerio


Alignment Length:1406 Identity:362/1406 - (25%)
Similarity:550/1406 - (39%) Gaps:426/1406 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 DRCINAVIE-LFQQLQTSSEPALCPEPLRRALASGPLAGRRFPLGCLGDAAECFELLLHRVHSHI 199
            |.||...:: :|.|.|.|||..|..:.||.|||......:||.||.:.|||||||.||.|:|.||
Zfish    74 DSCIFCALKSIFAQFQFSSEKVLPSDALRSALAKTFQDEQRFQLGIMDDAAECFENLLMRIHFHI 138

  Fly   200 SPDD-GDSCESSACIAHRRFAMRVIEQSVC-KCGANSEQLPFTQMVHYVSASALTSQKSLALQSH 262
            |.:. .|.|.:..||.|::|||.:.||.|| .|||.|:.|||.|||||:|.::|.|.:::.:...
Zfish   139 SDESKEDICTAKHCIPHQKFAMTLFEQCVCNNCGATSDPLPFIQMVHYISTTSLCSNQAVRMLEC 203

  Fly   263 QQL----SFGQLLRAAGNMGDIRDCPNTCGAKIGICRALLNRPEVVSIGIVWDSERPAADQVHAV 323
            ::.    .||:|||.|..|||:|:||:.||..:.|.|.|:|.||::|||:||||:.  :|....|
Zfish   204 KEKPTPDMFGELLRNASTMGDLRNCPSNCGEMLRIRRVLMNCPEIISIGLVWDSDH--SDLAEDV 266

  Fly   324 LKAVGTSLRLGDVFHQVSEPRWAQQTQHELVGIVSYYGKHYTTFFFHTKLKVWVYFDDANVKEVG 388
            :.::||.|||||:|::|::.| |:|::..|||:|.||||||:||||.||::.|:|||||:|||:|
Zfish   267 IHSLGTCLRLGDLFYRVTDER-AKQSELYLVGMVCYYGKHYSTFFFQTKIRKWMYFDDAHVKEIG 330

  Fly   389 PSWEGVVDKCSRGRYQPLLLLYAVPQ-QPTVGNGVGIGHVDVAMPASA----------PSIAGSV 442
            |.|:.||.:|.:|.|||||||||.|: .|.....:....:|:...:.|          |||:...
Zfish   331 PKWKDVVSRCIKGHYQPLLLLYADPRGTPVSSQDMLAAQLDLHHSSKAGYDSEDSGREPSISSDT 395

  Fly   443 VRRAVTPS--------------------------PEKPSLGNTRRAIT-------PTPLRTP-PN 473
            ...:.|.|                          ..:.|.|:.....|       .||:.|| |:
Zfish   396 RTDSSTDSYSYKHSRSHHESMASHFSSDSQGTVVCNQDSSGSQNSMDTAGEVLDQATPICTPRPS 460

  Fly   474 ------DY-QNLSVIQKNIFPSNLAMGTDETDAYI-SRKTVEHVLSAQYQNLSVIQDKIGGG--- 527
                  || :.:::|......|:.:.|...::|.. :|...:...|::.::.|      .||   
Zfish   461 STGHLQDYKETVNMIHSRPLSSSSSSGVGGSEAGARARDWEDESTSSESKSSS------SGGRYR 519

  Fly   528 ----------NGVGVGQQSVDKDGGF-------LSRKPIEAVLSAQLARRQHLQLQRSHSAESSS 575
                      |...:..:...:..|:       |...|:..|         |.:|.....||.|:
Zfish   520 PTWRPRREALNIDSIFSRERHRPVGYTTLGPSPLPEDPMSPV---------HGELVSVAVAEGSN 575

  Fly   576 GHASSNGS-SPPSDGLTMP--EHL----------NQPR---RRDSGNWSGDRNSAS--SASSTTL 622
            |.|...|. :..|.|...|  ||:          .|||   |.:||..|.:|||.|  |......
Zfish   576 GAAGETGDMTDGSGGAVEPGVEHVPNPPPLRGVEQQPRLIQRMESGYESSERNSNSPISMDMPLS 640

  Fly   623 DNP----YLYMVAKRGVAA------VPQSPTRHGLPYD---PGYDSFSLSSTDSYPPKHALNPQL 674
            |||    :.....||.|.:      ||:|.:...:..|   |.:.|.:||..:.......|..::
Zfish   641 DNPNSSAHRDFGNKRPVTSGPSWRTVPKSKSSSAILQDLKSPTWSSAALSLGEERSELDELQEEV 705

  Fly   675 A-------------KIPEAAMGVVPNGG------AMPHGHGNGQLALSGDCEKLCHEADQLLEKS 720
            |             |..|||.|..|...      .:.| .|.|     |..|....|||.|:|:|
Zfish   706 ARRARQQELQRKKEKEREAAQGFNPRPSKFMDLDELQH-QGKG-----GSFEHCLAEADSLIEQS 764

  Fly   721 RLVEESHDLETALVLCNAAAGRARAAMDAPYSNPHTMTFAR-MKHNTCVMRARSLHRRILVEKGA 784
            ..:|::.|..|||.|.:.|..:.|.:|....:|.|:.|.|. .|...|:.|||.|.:|:     .
Zfish   765 MRLEQAGDTATALALSHHAVSKLRFSMHEGSANTHSRTMAADAKLQKCMRRARGLQQRM-----Q 824

  Fly   785 ETEAMPELKHMREGSTSSVKHVRQNSKDRTLEKEQQQLQFQQIQQIQQIHQIQQQIPASIEIYAT 849
            :.:..|:.....:|..|                       :|...:|.:....|:     |::.|
Zfish   825 QQQEQPQEPSRPQGPIS-----------------------EQPGPVQVLLTDNQE-----EVWET 861

  Fly   850 LPKR----KSPLKALASASACDDNAIEYEQEKQLATSPGKPERESRSLFGRKDKEKEKRSRSEDR 910
            .|..    .|| :.:.|.|:|.::..:......|.....:|..:...:.....|:||:       
Zfish   862 NPDSVLGPPSP-QHMNSPSSCTNSPSQLSNRPSLNPGSSQPHPQESEVCSNWSKQKEE------- 918

  Fly   911 NKLTREFSLTETLLVNAKDTLKKHKEDKDEKKEKDKSGKKQHKIRRKLLMGGLIRRKNRSMPDL- 974
                      |...:...|.|:             .||.:...||:.|.:         |:|.| 
Zfish   919 ----------EWGGIRLSDVLQ-------------ASGIRVMPIRKHLAI---------SLPSLP 951

  Fly   975 -----TEAVDDSTANAGITHHPHYPAQGVTTAGTLLGTSVDDSAVGLGKHGHGMSGYISEGHFDY 1034
                 ....|:....|.|..:|:.|          |...:.||...:.:                
Zfish   952 LDFWGVLGEDEEHPQASIPQNPNPP----------LWQDIADSPEKVRQ---------------- 990

  Fly  1035 SGSGSASNSGAGSNPNPNLERSKLMRKSFHGSGRQLTMVP-------------KVAPPPPM---- 1082
                  ||:.....|..|.|:..:.|:           ||             |::||...    
Zfish   991 ------SNTSTSPTPATNEEKGSMPRR-----------VPIWQPLCTSSHPCNKLSPPVAARHWS 1038

  Fly  1083 -----RTSSTLTPQQQQQQQQQFHHEANLSNLSAMSSNTSISEDSCQTIITTCAQVHSEQSPLKD 1142
                 |..:.:||.....:|       ||...|.:|.:||...                      
Zfish  1039 SWSLDRPDAVITPYDTPPEQ-------NLRAGSVLSQHTSGRH---------------------- 1074

  Fly  1143 LQMLVAQDELPLPP--PMELPPYPSPPHSSCHSRQASEDFPPPPPPELDLEPL---NQQLSQLQA 1202
                       |||  ||.........|||..|              :||||.   :|:||:|.:
Zfish  1075 -----------LPPRSPMSTRKKNISKHSSFQS--------------IDLEPTEAEDQELSELDS 1114

  Fly  1203 LEAASKQQRQQL-ESLEGTTS-------------ILAQL-QQRQHLLKLRKEQANHPGAATTD-- 1250
            |..||.|..... .:|.||:|             :|..: :.|....:|.:.....||..:..  
Zfish  1115 LYQASLQAGPAPGRALRGTSSPAVGRSVPPAARKLLTGVGRSRTPTAELERTAYGPPGCYSPTGY 1179

  Fly  1251 -----ATWLKELQAKQ-----ANDLRAMQRKLEAS-----------------------------S 1276
                 :...:.||:::     |:.||.:.|.|..:                             |
Zfish  1180 MNMPLSVAHQGLQSEEDDQYDADHLRRIARSLSGTVIGRRQNRLAVSRSFLGDSGVSSCQSFMYS 1244

  Fly  1277 PSSVR------DLTHRFEQTSIRSYASQELLS-QPGQSQQL 1310
            ||.::      || |..:.:.:..:||...|| |||..:::
Zfish  1245 PSCLQFPLSHSDL-HLLQPSYLHHHASPSPLSPQPGPCREV 1284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ecNP_001096877.1 Peptidase_C19 183..410 CDD:239072 120/232 (52%)
usp54bXP_009305019.1 Peptidase_C19 34..352 CDD:239072 139/280 (50%)
UCH 34..352 CDD:278850 139/280 (50%)
Peptidase_C19 42..>131 CDD:271592 26/56 (46%)
Cgr1 659..>724 CDD:281823 11/64 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002086
OrthoInspector 1 1.000 - - otm25693
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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