DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2901 and VTC1

DIOPT Version :9

Sequence 1:NP_570077.1 Gene:CG2901 / 31338 FlyBaseID:FBgn0029679 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_010995.1 Gene:VTC1 / 856803 SGDID:S000000874 Length:129 Species:Saccharomyces cerevisiae


Alignment Length:56 Identity:16/56 - (28%)
Similarity:24/56 - (42%) Gaps:14/56 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   230 IALGMLIMLLVATAISYWKRA--------PLEDHT-PGLMRLFRGPFTWVIFNFYM 276
            :|:|.:|..||.   .:|:.|        |.:|.. |.|:..|.  ...||.||.:
Yeast    68 VAMGTMIYALVT---YHWRAAAIRRRGSGPYDDRLGPTLLCFFL--LVAVIINFIL 118

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2901NP_570077.1 COG5408 1..162 CDD:227695
SPX_XPR1_like 2..158 CDD:269898
EXS 260..597 CDD:281164 5/17 (29%)
VTC1NP_010995.1 VTC1 1..124 CDD:227589 16/56 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157343552
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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