DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2901 and AT4G22990

DIOPT Version :9

Sequence 1:NP_570077.1 Gene:CG2901 / 31338 FlyBaseID:FBgn0029679 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_001190805.1 Gene:AT4G22990 / 828398 AraportID:AT4G22990 Length:700 Species:Arabidopsis thaliana


Alignment Length:447 Identity:83/447 - (18%)
Similarity:151/447 - (33%) Gaps:146/447 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 FGKTYESHLTIEWRQQYMRYGDLKELIKQGVENAPSPLTSSDYEVQAYYKAFEETFLTECQSELT 67
            |||..:.....||:..|:.|    :|:|:.|:.....|...:.|.:...|.|....    .:::.
plant     4 FGKKLKERSIQEWQGYYINY----KLMKKKVKQYSRQLEGGNLERRHVLKDFSRML----DNQIE 60

  Fly    68 GVNNFFLEK--LLEARRKHGHLKLQLLAYSREPGHTGSDSSLSQRAERSQKKLMTTRQLRYAYAE 130
            .:..|.||:  ||.:|       ||.|        .||..:|.::.:.|...     .|:..|..
plant    61 KIALFMLEQQGLLASR-------LQTL--------RGSHDALQEQPDISHMS-----YLKEEYRA 105

  Fly   131 FYLSLVLIQNYQSLNETGFRKICKKYDKNMRSVAAGRWFVENVLDAPFTD-------------VR 182
            ....|:.:..:..:|..|.|||.||:||.. ......::|:...:.|:::             |.
plant   106 VGQDLLKLLFFVEMNAIGIRKILKKFDKRF-GYRFTNYYVKTRANHPYSELQQVFRHVGLGAVVG 169

  Fly   183 LLQRMTIEVEDLYTTHLANGDRSLAMEKLRVPPLGEPTPPSMVFRAGIALGMLIMLLVATAISYW 247
            .:.|...|:::...::|:..|:.       |.||.:|...|:                       
plant   170 AVSRNLHELQNNQGSYLSIYDQP-------VLPLQDPVVDSI----------------------- 204

  Fly   248 KRAPLEDHTPGLMRLFRGPFTWVIFNF--YMAANVAGWQQAGVNHILIF-------------EID 297
             ||.::       ||.|..      ||  :||           .|.||.             |.|
plant   205 -RAAVD-------RLTRST------NFLHFMA-----------QHALIMQEELPSPQDEEGEEED 244

  Fly   298 PRSHLQPA------TFLEIACTFGILWALSMLGFLYNDLIGVSDPYVFPLGLILIMVGLLVVPLP 356
            .|.|....      |||.:..|:.|              :..:|.|...||....:.|:::..:.
plant   245 GRYHFMSLLLNLVNTFLYMVNTYII--------------VPTADDYSMSLGAAATVCGVVIGAMA 295

  Fly   357 IMN---------WPARWWTIKLVGRVITAPLHYVGFADFWMGDQMNSLVSCIVDHYY 404
            :..         |..|.:...|   :.::.:.::|...:.:....||:...::...:
plant   296 VAQLFSSVYFSAWSNRSYFKPL---IFSSIVLFIGNLLYALAFDFNSIAVLLIGRLF 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2901NP_570077.1 COG5408 1..162 CDD:227695 39/160 (24%)
SPX_XPR1_like 2..158 CDD:269898 37/156 (24%)
EXS 260..597 CDD:281164 30/175 (17%)
AT4G22990NP_001190805.1 SPX-MFS_plant 2..141 CDD:269900 39/165 (24%)
MFS 249..699 CDD:421695 16/118 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.