DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd3F and FKH1

DIOPT Version :10

Sequence 1:NP_001356931.1 Gene:fd3F / 31336 FlyBaseID:FBgn0264954 Length:764 Species:Drosophila melanogaster
Sequence 2:NP_012135.1 Gene:FKH1 / 854675 SGDID:S000001393 Length:484 Species:Saccharomyces cerevisiae


Alignment Length:626 Identity:116/626 - (18%)
Similarity:197/626 - (31%) Gaps:242/626 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VNGTGSASSPTSNP---SSNNNNNSSTTNQNDTNTNLPG-DYNFLKRKFDDQEDLALGHDYEPIG 67
            ||......|.:|:|   ||:.:|:.|...:.:....:.| |:.:..:|.    ::.:|.:.:.:.
Yeast    26 VNAVTCVLSSSSDPVAVSSDYSNSLSIAREVNAYAKIAGCDWTYYVQKL----EVTIGRNTDSLN 86

  Fly    68 ANPWK----KRHLDYDAGD----------LHFHLQ--------------------LEQPPSNPPT 98
            .|...    |:::|.|.|.          :.|:|:                    :...|.:|||
Yeast    87 LNAVPGTVVKKNIDIDLGPAKIVSRKHAAIRFNLESGSWELQIFGRNGAKVNFRRIPTGPDSPPT 151

  Fly    99 NAAPAQSSTSFINDLFSYESSLLVP---AVAYSHC-----PPSSAPLDDNGGWTGGELLELDHRY 155
               ..||..  |.|:...:...::|   .:...:|     |...:....||  ....||......
Yeast   152 ---VLQSGC--IIDIGGVQMIFILPEQETIISDYCLNHLMPKLLSTYGTNG--NNNPLLRNIIEG 209

  Fly   156 NSGLQAELGQLNATLPPPPPTSSSAQNASNHTQQSTQQNVSPGQNPHQNQHFLVPQKQRIQSAGR 220
            ::.|:.:..|..|.|         .|....||..|:..:|:|..:||                  
Yeast   210 STYLREQRLQEEARL---------QQLDHLHTPLSSSSDVNPIGDPH------------------ 247

  Fly   221 RTSSGSVSGANEATEADFEDKNLSWLLNFKFDEFPHLSPHNQIHGQAVNLPEGSAPPHPPSTAVP 285
                    |.....|.|.||:|.:                           .|...|:..::   
Yeast   248 --------GDTIMMEEDEEDENYT---------------------------RGGIRPNTYTS--- 274

  Fly   286 IATSPCSSSSPSSASAASASASAISTNQSLGSGLVDQRARSPKSCSSAAMPAALGGGGNGSAGAS 350
                                    |:|.::.:|.| ....:|...|                   
Yeast   275 ------------------------SSNNAVTNGNV-PHIENPSDLS------------------- 295

  Fly   351 AAGGVAGVGSTKTGRKFEELVMEVTSELDGNDMIVAEHVVVEDTSSKAPKKPPFTYTELIEYAL- 414
                                       ||.|..|                |||.:|..:|..|: 
Yeast   296 ---------------------------LDENRYI----------------KPPQSYASMITQAIL 317

  Fly   415 -EDKGELTVSGIYQWISDRFPYYKSNDDRWKNSVRHNLSINPHFRKGVK--APQGAGHLWAISSG 476
             ..:|.::::.||::|||.:.:|:.:...|:||||||||:|..|.|..|  ..||.|..|.||..
Yeast   318 STPEGSISLADIYKFISDNYAFYRFSQMAWQNSVRHNLSLNKAFEKVPKRAGQQGKGMNWKISDE 382

  Fly   477 DSAENVLAWEHKKQRLDLFFKMESINRERIQQHQQQQQLQQHQQQHQQHSPQQKQHSAAQQQHMP 541
            ...:.:..|...|  |....:..|:.|          |||.|..:..:               :|
Yeast   383 VRRDFLNKWNAGK--LSKIRRGASVTR----------QLQLHMSKFGE---------------IP 420

  Fly   542 QASSCMYDEAAVAVATLTQEMMQTNSGGGSTETSQQQQQQQ 582
            ...|...|...:....:.:.:..|:|..|  |::.|.|:.|
Yeast   421 APESSSIDPRGIKAQKVKKSLQATSSILG--ESAPQLQRTQ 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd3FNP_001356931.1 Forkhead 401..473 CDD:459732 30/75 (40%)
FKH1NP_012135.1 COG5025 1..484 CDD:227358 116/626 (19%)

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