DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fd3F and HCM1

DIOPT Version :10

Sequence 1:NP_001356931.1 Gene:fd3F / 31336 FlyBaseID:FBgn0264954 Length:764 Species:Drosophila melanogaster
Sequence 2:NP_009991.2 Gene:HCM1 / 850429 SGDID:S000000661 Length:564 Species:Saccharomyces cerevisiae


Alignment Length:414 Identity:100/414 - (24%)
Similarity:148/414 - (35%) Gaps:155/414 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   400 KKPPFTYTELIEYAL--EDKGELTVSGIYQWISDRFPYYKSNDDRWKNSVRHNLSINPHFRKGVK 462
            ||||::|..||..|:  ..:|:||:|.||.||...|||||..|..|:||:|||||:|..|.|..|
Yeast   108 KKPPYSYATLICLAILQSQEGKLTLSQIYHWIHVHFPYYKQKDASWQNSIRHNLSLNDAFIKTEK 172

  Fly   463 APQGAGHLWAISSGDSAENVLAWEHKKQRLDLFFKMESINRERIQQHQQQQQLQQHQQQHQQHSP 527
            :..|.||.|.:..|...:              |||.|:...|.::...|                
Yeast   173 SCDGKGHFWEVRPGAETK--------------FFKGENRGYEFVKDSLQ---------------- 207

  Fly   528 QQKQHSAAQQQHMPQASSCMYDEAAVAVATLTQEMMQTNSGGGSTETSQQQQQQQQHHHHHSHQN 592
                            ....|.|    :.:...|:.|..||.|                      
Yeast   208 ----------------DIGKYFE----IDSTLDELEQVESGEG---------------------- 230

  Fly   593 HQNHNQHHQRLLPFNDLLSDDELRKTAGQILNGIHREVEVQSVNSI----ISTYHDV---LLDND 650
                          ||.|.|:|.|:.||:.     ..:|:| :||.    :|..|.:   ..||.
Yeast   231 --------------NDDLPDEEEREEAGKF-----PSIEIQ-LNSSPILRVSQLHHIPQLKTDNS 275

  Fly   651 YLNP----------IHKDVVVTES-----VLRQQHGTNLG------------GGNNNQN------ 682
            .|||          |..||...:|     |:::.| |:||            .|..|.|      
Yeast   276 VLNPHENLESMRNMIENDVNNIDSLEPPYVMKKYH-TSLGLPSLVNAKDHFQAGVKNNNITQANR 339

  Fly   683 -NQMGGNSHMGGGNSQYYIT-------EIDPMELGIQMSHQVEPSEEEVL-FSDEFNLNYFGYNP 738
             |.:...|.....|.:.|.|       ::.|:...:.....::|.....| ..|:.||       
Yeast   340 FNTLPITSAKSPQNFRKYFTSFNSNFEDLSPLRSNVGAGSLLDPLPYSPLKLYDQKNL------- 397

  Fly   739 GSDIVAXPRRQQTPVSA--PPAPA 760
              .::: |:.||:..::  ||.|:
Yeast   398 --ALMSKPQSQQSYSNSQLPPPPS 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd3FNP_001356931.1 Forkhead 401..473 CDD:459732 37/73 (51%)
HCM1NP_009991.2 COG5025 20..564 CDD:227358 100/414 (24%)

Return to query results.
Submit another query.