DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd3F and foxb1b

DIOPT Version :10

Sequence 1:NP_001356931.1 Gene:fd3F / 31336 FlyBaseID:FBgn0264954 Length:764 Species:Drosophila melanogaster
Sequence 2:NP_571358.2 Gene:foxb1b / 799571 ZFINID:ZDB-GENE-990415-77 Length:296 Species:Danio rerio


Alignment Length:205 Identity:62/205 - (30%)
Similarity:93/205 - (45%) Gaps:26/205 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   400 KKPPFTYTELIEYALEDKGE--LTVSGIYQWISDRFPYYKSNDDRWKNSVRHNLSINPHFRKGVK 462
            :|||::|..|...|::...|  |.:|.||::|.||||||:.|..||:||:|||||.|..|.|..:
Zfish    12 QKPPYSYISLTAMAIQSCPEKMLPLSEIYKFIMDRFPYYRENTQRWQNSLRHNLSFNDCFIKIPR 76

  Fly   463 APQ--GAGHLWAI--SSGDSAENVLAWEHKKQRLDLFFKMESINRERIQQHQQQQQLQQHQQQHQ 523
            .|.  |.|..||:  |.||..||. ::..:::|..:....|.:.:.....|..|||.:.......
Zfish    77 RPDQPGKGSFWALHPSCGDMFENG-SFLRRRKRFKVMISSEHLQKPSDAAHYLQQQAKLRMTALG 140

  Fly   524 QHSPQQKQHSAAQQQHMPQASSCMYDEAAVAVATLTQEMMQTNSGGGSTETSQQQQQQQQHHHHH 588
            .|.||...::.:    :.|.|:..:..|...:.....:|      .||...|..         |.
Zfish   141 THLPQMTSYNLS----VTQPSTFKHPFAIENIIARDYKM------PGSLAFSAM---------HS 186

  Fly   589 SHQNHQNHNQ 598
            ....:|.|||
Zfish   187 MSTGYQIHNQ 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd3FNP_001356931.1 Forkhead 401..473 CDD:459732 35/75 (47%)
foxb1bNP_571358.2 FH_FOXB2 1..110 CDD:410817 42/98 (43%)
PHA03247 <220..289 CDD:223021
Blue background indicates that the domain is not in the aligned region.

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