DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd3F and foxc1b

DIOPT Version :10

Sequence 1:NP_001356931.1 Gene:fd3F / 31336 FlyBaseID:FBgn0264954 Length:764 Species:Drosophila melanogaster
Sequence 2:NP_571804.1 Gene:foxc1b / 79375 ZFINID:ZDB-GENE-010302-2 Length:433 Species:Danio rerio


Alignment Length:275 Identity:73/275 - (26%)
Similarity:120/275 - (43%) Gaps:38/275 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   323 RARSPKSCSSAAMPAALGGGGNGSAGASAAGGVAGVGSTKTGRKFEELVMEVTSELDGNDMIVAE 387
            :||.|.|..|.........|..|....:..||..|:.:..:      :....|.|.....|..|.
Zfish     2 QARYPVSSQSPLGVVPYIPGDQGFYRTATGGGYTGMPAPMS------MYSHATHEQYPGGMARAY 60

  Fly   388 HVVVEDTSSKAPKKPPFTYTELIEYALEDKGE--LTVSGIYQWISDRFPYYKSNDDRWKNSVRHN 450
            .........|...|||::|..||..|:::..:  :|::||||:|.:|||:|:.|...|:||:|||
Zfish    61 GPYAPAQQPKDMVKPPYSYIALITMAIQNSSDKKITLNGIYQFIMERFPFYRDNKQGWQNSIRHN 125

  Fly   451 LSINPHFRKGVKAPQ-----GAGHLWAI--SSGDSAENVLAWEHKKQRLDLFFKMESINRERIQQ 508
            ||:|..|   ||.|:     |.|..|.:  .|.:..||. ::..:::|    ||.:.:.||:..:
Zfish   126 LSLNECF---VKVPRDDKKPGKGSYWTLDPDSYNMFENG-SFLRRRRR----FKKKDVLREKEDR 182

  Fly   509 HQQ-----QQQLQQHQQQHQQHSPQQKQHSAAQQQHMPQASSCMYDEAAVAVATLTQEMMQTNSG 568
            .:|     .|..:|..||..:....:.::.|....|          ::...::|:.:......||
Zfish   183 DRQGKDNPGQACEQDAQQPVKLRDIKTENGACTPPH----------DSTPPLSTVPKTESPDRSG 237

  Fly   569 GGSTETSQQQQQQQQ 583
            |.:...|.|.|..||
Zfish   238 GSACSGSPQSQTPQQ 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd3FNP_001356931.1 Forkhead 401..473 CDD:459732 34/78 (44%)
foxc1bNP_571804.1 FH_FOXC1 69..161 CDD:410818 37/94 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 174..250 16/85 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 318..355
Blue background indicates that the domain is not in the aligned region.

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