Protein Alignment fd3F and foxj1a

DIOPT Version :10

• Sequence 1: NP_001356931.1
• Gene: fd3F / 31336
• FlyBaseID: FBgn0264954
• Length: 764
• Species: Drosophila melanogaster
• Sequence 2: NP_001070174.2
• Gene: foxj1a / 767737
• ZFINID: ZDB-GENE-060929-1178
• Length: 458
• Species: Danio rerio
• Alignment Length: 535
• Identity: 108/535 - (20%)
• Similarity: 189/535 - (35%)
• Gaps: 167/535 - (31%)

  Fly   231 NEATEADFEDKNLS---WLLNFKF---DEFPHLSPHNQIHGQAVNLPEGSAPPHPPSTAVPIATS 289
            |.:.::|..|.:|:   ||..|..   ....|.||.:..|....:.|.......|.|..:|:
Zfish    40 NTSLDSDNLDDSLTSLQWLQEFSILNASTGQHTSPSSHSHLMGSDAPSSPLAGDPASIGMPL--- 101

  Fly   290 PCSSSSPSSASAASASASAISTNQSLGSGLVDQRARSPKSCSSAAMPAALGGGGNGSAGASAAGG 354
                 :|...:|||.                   .|.|   ..:|:|:.:..|
Zfish   102 -----TPGKPTAASF-------------------CRVP---MFSALPSLVAHG------------ 127

  Fly   355 VAGVGSTKTGRKFEELVMEVTSELDGNDMIVAEHVVVE-DTSSKAPKKPPFTYTELIEYALE--D 416
                                             |...| |..|....|||::|..||..|::  .
Zfish   128 ---------------------------------HCPDEVDYKSNPHIKPPYSYATLICMAMQASK 159

  Fly   417 KGELTVSGIYQWISDRFPYYKSNDDRWKNSVRHNLSINPHFRKGVKAPQ-----GAGHLWAISSG 476
            |.::|:|.||:||:|.|.|::..|..|:||:|||||:|..|   :|.|:     |.|..|.|..
Zfish   160 KTKITLSCIYKWITDNFCYFRHADPTWQNSIRHNLSLNKCF---IKVPRQKDEPGKGGFWKIDP- 220

  Fly   477 DSAENVLAWEHKKQRLDLFFKMESINRERIQQHQQQQQLQQHQ--QQHQQHSPQQKQ-------H 532
            ..||.:|...:||:||      ..:......||:.:...|...  .::...||:.:|       .
Zfish   221 QYAERLLNEAYKKRRL------PPVQINPALQHRLRMNAQATGVISRNLSVSPESQQLLKDFEEA 279

  Fly   533 SAAQQQHMPQASSCMYDEAAVAVATLTQEMMQTNSGGGSTETSQQQQQQQQHHHHHSHQNHQNHN 597
            ::|.|...|:          :|.||:....:   ||.|:.:..|.          ::|:..:...
Zfish   280 TSADQNWDPR----------LAEATMLSCWI---SGKGTNKRKQP----------YNHRTGKTPR 321

  Fly   598 QHHQRLLPFNDLLSDDELRKTAGQI---------LNGIHREVEVQSVNSIISTYHD--VLLDNDY 651
            :....||..::   .::|....|..         |||   |:.:...:.:..|..|  :::...:
Zfish   322 RSSSPLLVMDE---QEDLSSLRGNFDWDALLDSALNG---ELSLNEGSPLSPTPQDEELMIRGTH 380

  Fly   652 LNPIHKDVVVTESVLRQQHGTNLGGGNNNQNNQMGGNSHMGG--------------GNSQYYITE 702
            ::|  ::..|...||.:   |...|..:.........:.:..              |:|...|.:
Zfish   381 ISP--QEAPVENHVLME---TQRSGDEDFDEETFLATAFLQSPWSEVDESNRSDFLGSSTVSIDQ 440

  Fly   703 IDPMELGIQMSHQVE 717
            :..:..|..:|.::|
Zfish   441 LFDLSFGGDLSSKIE 455

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
fd3F	NP_001356931.1	Forkhead	401..473	CDD:459732	33/78 (42%)
foxj1a	NP_001070174.2	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	68..99		7/30 (23%)
		FH_FOXJ1	142..220	CDD:410797	34/80 (43%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	305..324		2/28 (7%)