DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd3F and foxg1c

DIOPT Version :10

Sequence 1:NP_001356931.1 Gene:fd3F / 31336 FlyBaseID:FBgn0264954 Length:764 Species:Drosophila melanogaster
Sequence 2:NP_001038680.2 Gene:foxg1c / 571323 ZFINID:ZDB-GENE-050419-26 Length:379 Species:Danio rerio


Alignment Length:323 Identity:77/323 - (23%)
Similarity:114/323 - (35%) Gaps:94/323 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   323 RARSPKSCSSAAMPAALGGGGNGSAGASAAGGVAGVGSTKTGRKFEELVMEVTSELDGNDMIVAE 387
            |:||.|..:....||                       .|..|:..||... |.:.||......|
Zfish    37 RSRSAKPPARCHQPA-----------------------DKPVRERNELATR-TEKKDGVGEPKCE 77

  Fly   388 HVVVEDTSSKAPKKPPFTYTELIEYALEDKGE--LTVSGIYQWISDRFPYYKSNDDRWKNSVRHN 450
            ...|.:..|| |.||||:|..||..|:....|  ||::|||::|...||||:.|...|:||:|||
Zfish    78 GTDVPEKKSK-PDKPPFSYNALIMMAIRQSPERRLTLNGIYEFIMGNFPYYRENRQGWQNSIRHN 141

  Fly   451 LSINPHFRKGVKAPQ-----GAGHLWAISSGDSAENVLAWEHKKQRLDLFFKMESINRERIQQHQ 510
            ||:|..|   ||.|:     |.|:.|.:........:.....|.:|     :..:.:|.::...:
Zfish   142 LSLNKCF---VKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRR-----RSTAASRAKLAMKR 198

  Fly   511 QQQQLQQHQQ-------------------QHQQHSPQQKQHS-------------------AAQQ 537
            ..:.......                   ||:..||....||                   ||::
Zfish   199 GARLSSTAASAGLAFAGSFYWPVPPFVTLQHRHSSPAAAHHSNYAASVLSQSARHFSSVAPAAER 263

  Fly   538 QHMPQASSCMYDEAAVAVATLTQEMMQTNSGGGSTETS---------QQQQQQQQHHHHHSHQ 591
            ..:|.:....|       ..:..|.|.::|...||..|         .......|..:.:|||
Zfish   264 LLIPSSQEATY-------YGMGCEQMTSSSSSFSTSASVPLPLSAPCSFNLLSNQSSYFYSHQ 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd3FNP_001356931.1 Forkhead 401..473 CDD:459732 36/78 (46%)
foxg1cNP_001038680.2 None

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