DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd3F and foxi3

DIOPT Version :10

Sequence 1:NP_001356931.1 Gene:fd3F / 31336 FlyBaseID:FBgn0264954 Length:764 Species:Drosophila melanogaster
Sequence 2:XP_012818282.1 Gene:foxi3 / 549541 XenbaseID:XB-GENE-5996107 Length:381 Species:Xenopus tropicalis


Alignment Length:478 Identity:98/478 - (20%)
Similarity:167/478 - (34%) Gaps:169/478 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   190 STQQNVSPGQNPHQNQHFLVPQKQRIQSAGRRTSSGSVSGANEATEADFEDKNLSWLLNFKFDEF 254
            |.|:..:||.:.|:.:                       ||.||:|......|.|..        
 Frog     8 SHQRTSAPGLHQHRPK-----------------------GAQEASEMAVYCDNFSMY-------- 41

  Fly   255 PHLSPHNQIHGQAVNLPEGSAPPH-------PPSTAVPIATSPCSSSSPSSASAASASASAISTN 312
                 |.|      ||......|:       ||:........|..|:|||..             
 Frog    42 -----HQQ------NLHSSQRAPNYGIGDYAPPTNPYLWLGGPGVSNSPSYL------------- 82

  Fly   313 QSLGSGLVDQRARSPKSCSSAAMPAALGGGGNGSAGASAAGGVAGVGSTKTGRKFEELVMEVTSE 377
                      ...||.|    .||.                      |.::.|:|    :..:|.
 Frog    83 ----------HGNSPAS----FMPP----------------------SYRSQRQF----LSNSSS 107

  Fly   378 LDGNDM----IVAEHVVVEDTSSKAPKKPPFTYTELIEYALEDKGE--LTVSGIYQWISDRFPYY 436
            ..|.|:    :.::..:::..      :||::|:.||..|:::..|  ||:|.|||:::|.||:|
 Frog   108 FCGTDLSWLSVASQEELLKVV------RPPYSYSALIAMAIQNAPEKKLTLSQIYQYVADNFPFY 166

  Fly   437 KSNDDRWKNSVRHNLSINPHFRKGVKAPQ-----GAGHLWAISSGDSAENVL---AWEHKKQRLD 493
            |.:...|:||:|||||:|..|:   |.|:     |.|:.|.:.  .:.|.:.   .:..|::|  
 Frog   167 KRSKAGWQNSIRHNLSLNDCFK---KVPRDEDDPGKGNYWTLD--PNCEKMFDNGNFRRKRKR-- 224

  Fly   494 LFFKMESINRERIQQHQQQQQLQ------QHQQQHQQHSPQQKQHSAAQQQHMPQ---ASSCM-- 547
               :.:|.:.|.:....::.:..      :........||:.:..|..::...|.   :|.|:  
 Frog   225 ---RSDSSSAEAVTVKGEEGRPALGGKGGESPLMLTPSSPELEAASDGRKSTSPSGITSSPCLNN 286

  Fly   548 YDEAAVAVAT----------LTQEMMQTN-------SGGGSTETSQQQQQQQQHHHHHS------ 589
            :..:..::.|          |..|:.|.|       :.|...|.|...|....|.:..|      
 Frog   287 FFSSMTSLDTTSVNRQMSMGLVNELSQRNITGLGSFTSGSVAEPSVDLQDNSLHLNRPSYYSTLS 351

  Fly   590 --HQNHQNHNQHHQRLLPFNDLL 610
              |||:| .|.|.......|.|:
 Frog   352 STHQNNQ-FNSHFYNTFSVNSLI 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd3FNP_001356931.1 Forkhead 401..473 CDD:459732 33/78 (42%)
foxi3XP_012818282.1 FH_FOX 126..218 CDD:469596 34/102 (33%)

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