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Protein Alignment fd3F and foxi1

DIOPT Version :10

Sequence 1:	NP_001356931.1	Gene:	fd3F / 31336	FlyBaseID:	FBgn0264954	Length:	764	Species:	Drosophila melanogaster
Sequence 2:	NP_988949.1	Gene:	foxi1 / 394546	XenbaseID:	XB-GENE-494125	Length:	373	Species:	Xenopus tropicalis

Alignment Length:	304	Identity:	71/304 - (23%)
Similarity:	114/304 - (37%)	Gaps:	79/304 - (25%)

- Green bases have known domain annotations that are detailed below.

  Fly   273 GSAPP----------HPPSTAVPIATSPCSSSSPSSASAASASASAISTNQSLGSGLVDQRARSP 327
            |..||          ||       .|.| |...||:...|..|.:| :....|....:......|
Frog    22 GQEPPEMNIYCDSIFHP-------QTMP-SPQRPSNFETADYSTTA-NPYLWLNGPSITPPPYLP 77

  Fly   328 KSCSSAAMPAALGGGGNGSAGASAAGGVAGVGSTKTG----RKFEELVMEVTSELDGNDMIVAEH 388
            .|.:|..||.:.|      ........:.|:|.:..|    ...|||:..|
Frog    78 GSNTSHFMPQSYG------MQRQLLPNMHGLGGSDLGWLPIPSQEELMKLV-------------- 122

  Fly   389 VVVEDTSSKAPKKPPFTYTELIEYALE---DKGELTVSGIYQWISDRFPYYKSNDDRWKNSVRHN 450
                        :||::|:.||..|:.   || .||:|.|||:::|.||:|..:...|:||:|||
Frog   123 ------------RPPYSYSALIAMAIHGAPDK-RLTLSQIYQYVADNFPFYNKSKAGWQNSIRHN 174

  Fly   451 LSINPHFRKGVKAPQ-----GAGHLWAISSG--DSAENVLAWEHKKQRLDLFFKMESINRERIQQ 508
            ||:|..|:   |.|:     |.|:.|.:...  ...:|......:|::.|:     |.|.:....
Frog   175 LSLNDCFK---KVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRKSDV-----SPNGQISSD 231

  Fly   509 HQQQQQLQQHQQQHQQH-----SPQQKQHSAAQQQHMPQASSCM 547
            ..:...|.:..:..:.|     |......|:.::...|..:.|:
Frog   232 KPEGSPLNESPKNGEHHDMLGNSSPGTDDSSEKRSPPPSITPCL 275

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.