DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd3F and fd59A

DIOPT Version :10

Sequence 1:NP_001356931.1 Gene:fd3F / 31336 FlyBaseID:FBgn0264954 Length:764 Species:Drosophila melanogaster
Sequence 2:NP_523814.1 Gene:fd59A / 37631 FlyBaseID:FBgn0004896 Length:456 Species:Drosophila melanogaster


Alignment Length:207 Identity:56/207 - (27%)
Similarity:81/207 - (39%) Gaps:75/207 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   281 STAVPIATSPCSSSS-----PSSASAASASASAISTNQSLGSGLVDQRARSPKSCSSAAM-PAAL 339
            |.:.|:..|....||     ..|||:.:|:|.|:|                 ..|..:.: |:::
  Fly    16 SLSPPLIKSSRGGSSIGNGIGCSASSRTAAADAMS-----------------MGCDDSDIEPSSM 63

  Fly   340 GG----GGNGSAGASAAGGVAGVGSTKTGRKFEELVMEVTSELDGNDMIVAEHVVVEDTSSKAPK 400
            ||    ||||....|:.|.:.                                            
  Fly    64 GGSGAAGGNGDGSGSSGGPLV-------------------------------------------- 84

  Fly   401 KPPFTYTELIEYAL--EDKGELTVSGIYQWISDRFPYYKSNDDRWKNSVRHNLSINPHFRKGVKA 463
            |||::|..||..|:  ....:||:|||..:|..||||||.....|:||:|||||:|..|.|..:.
  Fly    85 KPPYSYIALITMAILQSPHKKLTLSGICDFIMSRFPYYKDKFPAWQNSIRHNLSLNDCFIKVPRE 149

  Fly   464 P--QGAGHLWAI 473
            |  .|.|:.|.:
  Fly   150 PGNPGKGNFWTL 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd3FNP_001356931.1 Forkhead 401..473 CDD:459732 34/75 (45%)
fd59ANP_523814.1 FH_FOXD4-like 85..180 CDD:410822 34/77 (44%)

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