DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd3F and fd19B

DIOPT Version :10

Sequence 1:NP_001356931.1 Gene:fd3F / 31336 FlyBaseID:FBgn0264954 Length:764 Species:Drosophila melanogaster
Sequence 2:NP_608369.1 Gene:fd19B / 33010 FlyBaseID:FBgn0031086 Length:260 Species:Drosophila melanogaster


Alignment Length:357 Identity:88/357 - (24%)
Similarity:123/357 - (34%) Gaps:151/357 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   288 TSPCSSSSPSSASAASASASAISTNQSLGSGLVDQRARSP----------KSCSSAAMPAALGGG 342
            |:|...||.|..|..|                ||::..||          .||||::        
  Fly     3 TTPIFQSSFSIRSLLS----------------VDKKEESPISKHNSGSSFSSCSSSS-------- 43

  Fly   343 GNGSAGASAAGGVAGVGSTKTGRKFEELVMEVTSELDGNDMIVAEHVVVEDTSSKAPKKPPFTYT 407
            .|.|:.:.||                                            |:..||.|||:
  Fly    44 SNSSSDSMAA--------------------------------------------KSNAKPAFTYS 64

  Fly   408 ELIEYALEDKGE--LTVSGIYQWISDRFPYYKSNDDRWKNSVRHNLSINPHFRKGVKAPQ----- 465
            .||..|:....|  ||:|||.:||:|.||||::....|:||:|||||:||.|   |:.|:     
  Fly    65 ALIVMAIWSSSEKRLTLSGICKWIADNFPYYRTRKSVWQNSIRHNLSLNPFF---VRVPRALDDP 126

  Fly   466 GAGHLWA-------ISSGDSAENVLA--WE-----------HKKQRLDLFFKMESINRERIQQHQ 510
            |.||.||       :|.|::...:..  |:           |..||:. ::.....|...|:.|.
  Fly   127 GRGHYWALDPYAEDLSIGETTGRLRRSNWQQNTGARPKVTGHPYQRMP-YYGHGHGNGPYIKAHS 190

  Fly   511 QQQQLQQHQQQHQQHSPQQKQHSAAQQQHMPQASSCMYDEAAVAVATLTQEMMQTNSGGGSTETS 575
            ....:..|            ||.||..||.                   |.||.           
  Fly   191 AYFPIMDH------------QHHAAMVQHY-------------------QAMMH----------- 213

  Fly   576 QQQQQQQQHHHHHSHQNHQNHNQHHQRLLPFN 607
            :.|.....|||.|.||:...|:...|:..|.:
  Fly   214 RYQMMPHPHHHQHQHQHQHPHSHFIQQSKPLH 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd3FNP_001356931.1 Forkhead 401..473 CDD:459732 39/85 (46%)
fd19BNP_608369.1 Forkhead 58..140 CDD:459732 39/84 (46%)

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