DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd3F and foxb1a

DIOPT Version :10

Sequence 1:NP_001356931.1 Gene:fd3F / 31336 FlyBaseID:FBgn0264954 Length:764 Species:Drosophila melanogaster
Sequence 2:NP_571360.1 Gene:foxb1a / 30542 ZFINID:ZDB-GENE-990616-47 Length:297 Species:Danio rerio


Alignment Length:152 Identity:55/152 - (36%)
Similarity:77/152 - (50%) Gaps:20/152 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   400 KKPPFTYTELIEYALEDKGE--LTVSGIYQWISDRFPYYKSNDDRWKNSVRHNLSINPHFRKGVK 462
            :|||::|..|...|::...|  |.:|.||::|.||||||:.|..||:||:|||||.|..|.|..:
Zfish    12 QKPPYSYISLTAMAIQSCPEKMLPLSEIYKFIMDRFPYYRENTQRWQNSLRHNLSFNDCFIKIPR 76

  Fly   463 APQ--GAGHLWAI--SSGDSAENVLAWEHKKQRLDLFFKMESINRERIQQHQQQQQLQQHQQQHQ 523
            .|.  |.|..||:  |.||..||......:|:     ||:.:      .:|....:........|
Zfish    77 RPDQPGKGSFWALHPSCGDMFENGSFLRRRKR-----FKVMT------SEHLAPSKPSDAAHYLQ 130

  Fly   524 QHSPQQKQHSAAQQQHMPQASS 545
            ||:   |...:|...|:||.||
Zfish   131 QHA---KLRLSALGTHLPQMSS 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd3FNP_001356931.1 Forkhead 401..473 CDD:459732 35/75 (47%)
foxb1aNP_571360.1 FH_FOXB2 1..110 CDD:410817 42/102 (41%)

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