Protein Alignment fd3F and foxa

DIOPT Version :10

• Sequence 1: NP_001356931.1
• Gene: fd3F / 31336
• FlyBaseID: FBgn0264954
• Length: 764
• Species: Drosophila melanogaster
• Sequence 2: NP_571357.2
• Gene: foxa / 30539
• ZFINID: ZDB-GENE-990415-76
• Length: 355
• Species: Danio rerio
• Alignment Length: 162
• Identity: 55/162 - (33%)
• Similarity: 76/162 - (46%)
• Gaps: 33/162 - (20%)

  Fly   330 CSSAAMPAALGGGGNGSAG----ASAAGGVAGVGSTKTGRKFEELVMEVTSELDGNDMIVAEHVV 390
            |.||  ||...|.....||    |:.....|.:.|::.  :|:||                 ..|
Zfish    49 CDSA--PAVNPGRLGSPAGLLPPANPPKAYAEINSSEP--EFQEL-----------------KSV 92

  Fly   391 VEDTSSKAPKKPPFTYTELIEYALEDK--GELTVSGIYQWISDRFPYYKSNDDRWKNSVRHNLSI 453
            ...|.|.|  |||::|..||..|::..  ..||::.||.||...||||:.|..||:||:||:||.
Zfish    93 YRRTLSHA--KPPYSYISLICMAIQQSPAKRLTLNEIYDWIRQLFPYYRQNQQRWQNSIRHSLSF 155

  Fly   454 NPHFRKGVKAPQ--GAGHLWAI--SSGDSAEN 481
            |..|.:..::|.  |.|..||:  .||:..||
Zfish   156 NDCFVRVPRSPDSPGKGSYWALHPDSGNMFEN 187

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
fd3F	NP_001356931.1	Forkhead	401..473	CDD:459732	32/75 (43%)
foxa	NP_571357.2	FH_FOX	101..197	CDD:469596	37/87 (43%)