DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd3F and foxd2

DIOPT Version :10

Sequence 1:NP_001356931.1 Gene:fd3F / 31336 FlyBaseID:FBgn0264954 Length:764 Species:Drosophila melanogaster
Sequence 2:NP_571346.2 Gene:foxd2 / 30525 ZFINID:ZDB-GENE-980605-6 Length:369 Species:Danio rerio


Alignment Length:242 Identity:63/242 - (26%)
Similarity:93/242 - (38%) Gaps:78/242 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   344 NGSAGASAAG-GVAGVGSTKTGRKFEELVMEVTSELDGNDMIVAEHVVVEDTSSKAPKKPPFTYT 407
            |...||.:.| ......:.:.|::.:.....:|.:..|.:.:|               |||::|.
Zfish    52 NAGEGAISPGQSSLDCPADRVGQRDDSRTGALTGDKPGKNALV---------------KPPYSYI 101

  Fly   408 ELIEYAL--EDKGELTVSGIYQWISDRFPYYKSNDDRWKNSVRHNLSINPHFRKGVKAPQ----- 465
            .||..|:  ..|..||:|.|.::||:|||||:.....|:||:|||||:|..|   ||.|:     
Zfish   102 ALITMAILQSPKKRLTLSEICEFISNRFPYYREKFPAWQNSIRHNLSLNDCF---VKIPREPGNP 163

  Fly   466 GAGHLWAI--SSGDSAENVLAWEHKKQRLDLFFKMESINRERIQQHQ------------------ 510
            |.|:.|.:  .|.|..:|           ..|.:    .|:|.::||                  
Zfish   164 GKGNYWTLDPESADMFDN-----------GSFLR----RRKRFKRHQTNEILREAGGFLPGFGYG 213

  Fly   511 --------QQQQLQQHQQQHQQHS----PQQKQHSAAQQQHMPQASS 545
                    |.|....|...|..|.    |.|..|.|     :|..||
Zfish   214 PYGYNYGLQLQNFHAHHPYHPHHPGSAFPFQNTHCA-----LPTPSS 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd3FNP_001356931.1 Forkhead 401..473 CDD:459732 35/78 (45%)
foxd2NP_571346.2 FH_FOXD1_D2-like 95..193 CDD:410820 41/115 (36%)

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