DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd3F and Foxi1

DIOPT Version :10

Sequence 1:NP_001356931.1 Gene:fd3F / 31336 FlyBaseID:FBgn0264954 Length:764 Species:Drosophila melanogaster
Sequence 2:NP_001099246.1 Gene:Foxi1 / 287185 RGDID:1307421 Length:372 Species:Rattus norvegicus


Alignment Length:429 Identity:87/429 - (20%)
Similarity:141/429 - (32%) Gaps:163/429 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 LPPPPPTSSSAQNASNHTQQSTQQNVSPGQNPHQ----NQHFLVPQKQRIQSAGRRTS--SGSVS 228
            ||.|.|...|.|..            |.||.|.:    .::|..|  |.:.|..|.||  .|...
  Rat     6 LPAPSPPRCSPQFP------------SIGQEPPEMNLYYENFFHP--QGMPSPQRPTSFEGGGEY 56

  Fly   229 GANEATEADFEDKNLSWLLNFKFDEFPHLSPHNQIHGQAVNLPEGSAPPHPPSTAVPIATSPCSS 293
            ||..                         :|:..::|.|:     :.||:.|.|          :
  Rat    57 GATP-------------------------NPYLWLNGTAM-----TPPPYLPGT----------N 81

  Fly   294 SSPSSASAASASASAISTNQSLGSGLVDQRARSPKSCSSAAMPAALGGGGNGSAGASAAGGVAGV 358
            :||....|...                 ||...|.......:|:.                    
  Rat    82 ASPFLPQAYGM-----------------QRQLLPSELGWLPIPSQ-------------------- 109

  Fly   359 GSTKTGRKFEELVMEVTSELDGNDMIVAEHVVVEDTSSKAPKKPPFTYTELIEYALEDKGE--LT 421
                     |||:..|                          :||::|:.||..|:....:  ||
  Rat   110 ---------EELMKLV--------------------------RPPYSYSALIAMAIHGAPDQRLT 139

  Fly   422 VSGIYQWISDRFPYYKSNDDRWKNSVRHNLSINPHFRKGVKAPQ-----GAGHLWAISSG--DSA 479
            :|.|||:::|.||:|..:...|:||:|||||:|..|:   |.|:     |.|:.|.:...  ...
  Rat   140 LSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDCFK---KVPRDEDDPGKGNYWTLDPNCEKMF 201

  Fly   480 ENVLAWEHKKQRLDLFFKMESINRERIQQH---------QQQQQLQQHQQQHQQHSPQQKQHSAA 535
            :|......:|::.|......|:..|:.:..         :.|:.|..........||:::...| 
  Rat   202 DNGNFRRKRKRKSDASSSTGSLASEKTENRLLSSSPKPTEPQEVLDTASPDTTSSSPEKRSSPA- 265

  Fly   536 QQQHMPQASSCMYDEAAVAVATLTQEMMQTNSGGGSTET 574
                 |..:.|:.:    .::|:|..:..||....|..|
  Rat   266 -----PSGTPCLNN----FLSTMTAYVNGTNPISRSAAT 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd3FNP_001356931.1 Forkhead 401..473 CDD:459732 31/78 (40%)
Foxi1NP_001099246.1 FH_FOXI1 114..213 CDD:410827 34/127 (27%)

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