DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd3F and fhl1

DIOPT Version :10

Sequence 1:NP_001356931.1 Gene:fd3F / 31336 FlyBaseID:FBgn0264954 Length:764 Species:Drosophila melanogaster
Sequence 2:NP_594272.1 Gene:fhl1 / 2541552 PomBaseID:SPAC1142.08 Length:743 Species:Schizosaccharomyces pombe


Alignment Length:646 Identity:119/646 - (18%)
Similarity:202/646 - (31%) Gaps:251/646 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 EQPPSNPPTNAAPAQSSTSFINDLFSYESSLL--------------------VPAVAYSHCP--- 131
            :||.|   ||...|.:...|  :.||:....|                    ..|::..|..   
pombe    11 QQPSS---TNRVQAYAKLEF--EKFSFFVQTLQVTMGRKASNSSDCDVHLGDTKAISRQHAKIFY 70

  Fly   132 --PSS----APLDDNGGWTGGELLELDHR--YNSGLQAELGQLNATLPPPPPTSSSAQNASNHTQ 188
              |:.    :.:..||.:..||.:|....  ..||.:.::||::.:...|     .......|.:
pombe    71 SFPNQRFEISVMGKNGAFVDGEFVERGKSVPLRSGTRVQIGQISFSFLLP-----EGSEEDGHLK 130

  Fly   189 QS--TQQNVSPGQNPHQNQHFLVPQKQRIQSAGRRTSSGSVSGANEATEADFEDKNLSWLLNFKF 251
            ::  |..::..|:..:.::.           .|:.|.|.....:|       ::|:|.       
pombe   131 ETGITPLSLQQGKIAYSDEF-----------GGKPTGSFHTVTSN-------QEKDLL------- 170

  Fly   252 DEFPHLSPHNQIHGQAVNLPEGSAP------------PHP-------------PSTAVPIATSPC 291
              |.|:...:       :||.|.:|            .||             |...:.::.|..
pombe   171 --FSHIKHES-------DLPLGLSPADTNISNATSIIEHPDAANAHTLASLNQPPKHLTVSPSSI 226

  Fly   292 SSSSPSSASAASASASAISTNQSLGSGLV---DQRARSPKSCSSAAMPAALGGGGNGSAGASAAG 353
            ...||......::....|.|:.|:.:..|   |:..:..||.|.:                    
pombe   227 QRLSPQPYVRPTSDERPIETDSSVSAPKVANHDEELKQGKSTSPS-------------------- 271

  Fly   354 GVAGVGSTKTGRKFEELVMEVTSELDGNDMIVAEHVVVEDTSSKAPKKPPFTYTELIEYAL--ED 416
                           :.|:.  .:|:|:          .||.. |.:||..:|..||...|  ..
pombe   272 ---------------DTVLH--PDLNGS----------PDTGD-ATQKPNLSYANLIARTLIANP 308

  Fly   417 KGELTVSGIYQWISDRFPYYKSNDDRWKNSVRHNLSINPHFRKGVKAPQ-----GAGHLW----- 471
            ..::|:..|.:||::.:.||:.....|.||:|||||:|..|   ::.|:     |.|..|     
pombe   309 NKKMTLGDICEWIANNWSYYRHQPPAWHNSIRHNLSLNKAF---IRIPRRQNEPGKGSFWMLDPS 370

  Fly   472 ----------------------------------------AISSGDS------------------ 478
                                                    .||:|.:                  
pombe   371 YIDQFEGNFFRRTKKPTPSATPAAHPDTARENELAAIQTKGISAGKTEQLNPQKETSRSKTHTSR 435

  Fly   479 AENVLAWEHKKQRL-------------DLFFKMESINRERIQQHQQQQQLQQHQQQHQQHSPQQK 530
            .|||   |.:.|.|             .|....|.......:|....:|..|.....|||..:|.
pombe   436 GENV---EDRPQSLLQNGIQPIIMRDGKLALNPEFFKNANGEQQAPNEQAVQAISLLQQHINKQL 497

  Fly   531 QHSAAQQQHMPQASSCMYDEAAVAVATLTQEMMQTNSGGGSTETSQQQQQQQQHHHHHSHQ 591
            ..:||..   |:.::.:.:..|||:|...|: .||...|     .||.|||.:....::.|
pombe   498 GPAAANN---PEQATAIANALAVALAQKLQK-QQTQMQG-----PQQVQQQAKRRKAYTSQ 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd3FNP_001356931.1 Forkhead 401..473 CDD:459732 26/123 (21%)
fhl1NP_594272.1 COG5025 1..564 CDD:227358 119/646 (18%)

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