DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd3F and fkh-6

DIOPT Version :10

Sequence 1:NP_001356931.1 Gene:fd3F / 31336 FlyBaseID:FBgn0264954 Length:764 Species:Drosophila melanogaster
Sequence 2:NP_494775.1 Gene:fkh-6 / 181907 WormBaseID:WBGene00001438 Length:323 Species:Caenorhabditis elegans


Alignment Length:170 Identity:50/170 - (29%)
Similarity:73/170 - (42%) Gaps:59/170 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   388 HVVVEDTSSKAPKKPPFTYTELIEYALE---DKGELTVSGIYQWISDRFPYYKSNDDR----WKN 445
            |:|.|..|.   .|||::|..||..|::   || .:|::.||::|..:||||:..|.:    |:|
 Worm    11 HIVQEGNSI---DKPPYSYVALIAMAIDASPDK-RMTLNQIYKFIEAKFPYYRDADAKRKQGWQN 71

  Fly   446 SVRHNLSINPHF-------------RKG-------VKAPQ--------------GAGHLWAISSG 476
            |:|||||:|..|             |||       ..|||              |.|.:...::.
 Worm    72 SIRHNLSLNDCFVKKARDGQSCANDRKGNYWQMVADNAPQFDNGNFKRRRVKRLGIGKMGYANTT 136

  Fly   477 DSAE------------NVLAWEHKKQRLD--LFFKMESIN 502
            ::.|            |.|.|....|.:|  .|||.:..|
 Worm   137 ETTETGTILQQQLPFFNGLKWPQNIQTMDPFQFFKFQYPN 176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd3FNP_001356931.1 Forkhead 401..473 CDD:459732 36/112 (32%)
fkh-6NP_494775.1 FH_FOXL2 21..116 CDD:410802 34/95 (36%)

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