DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd3F and let-381

DIOPT Version :10

Sequence 1:NP_001356931.1 Gene:fd3F / 31336 FlyBaseID:FBgn0264954 Length:764 Species:Drosophila melanogaster
Sequence 2:NP_491826.1 Gene:let-381 / 172331 WormBaseID:WBGene00002601 Length:362 Species:Caenorhabditis elegans


Alignment Length:252 Identity:64/252 - (25%)
Similarity:97/252 - (38%) Gaps:74/252 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   349 ASAAGGVAGVGSTKTGRKFEELVMEVTSELDGNDMIVAEHVVVEDT----------SSKAPKKPP 403
            |:|.|.:. :.||........:..|.....|..|.....|...||:          |.|..:|||
 Worm    11 ANALGPLK-LDSTAPNNSHRTIKAENYFNEDEEDYNENSHEDSEDSKEDSDGQGCRSRKRKEKPP 74

  Fly   404 FTYTELIEYALE---DKGELTVSGIYQWISDRFPYYKSNDDRWKNSVRHNLSINPHFRKGVKAPQ 465
            |:|..||..|:.   || :.|::.||.::.:.|.:::.....|:||:|||||:|..|   ||.|:
 Worm    75 FSYIALIAMAISKRPDK-KATLAEIYSYLQENFEFFRGEYAGWRNSIRHNLSLNECF---VKLPK 135

  Fly   466 GA--------GHLWAISSGDSAENVLAWEHKKQRLDLFFKMESINRERIQQHQQQQQLQQHQQQH 522
            ..        ||.|.||  ||.|               |.:|.....|                 
 Worm   136 DTGESYRGRKGHKWTIS--DSCE---------------FMLEENGFRR----------------- 166

  Fly   523 QQHSPQQKQHSAAQQQHMPQASSCMYDEAAVAVATL-----TQEMMQTNSGGGSTET 574
                 :.:.:.|.::.|.|..::.  :|..:..||.     |.|:  |:||..|..|
 Worm   167 -----RPRGYKARKRTHFPGVTAS--NEMGIGGATFDYPSSTTEL--TDSGTSSLNT 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd3FNP_001356931.1 Forkhead 401..473 CDD:459732 30/82 (37%)
let-381NP_491826.1 FH_FOXF 73..153 CDD:410794 31/85 (36%)

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