DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd3F and Foxc2

DIOPT Version :10

Sequence 1:NP_001356931.1 Gene:fd3F / 31336 FlyBaseID:FBgn0264954 Length:764 Species:Drosophila melanogaster
Sequence 2:NP_038547.2 Gene:Foxc2 / 14234 MGIID:1347481 Length:494 Species:Mus musculus


Alignment Length:213 Identity:60/213 - (28%)
Similarity:90/213 - (42%) Gaps:43/213 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   398 APK---KPPFTYTELIEYALEDKGE--LTVSGIYQWISDRFPYYKSNDDRWKNSVRHNLSINPHF 457
            |||   |||::|..||..|:::..|  :|::||||:|.||||:|:.|...|:||:|||||:|..|
Mouse    65 APKDLVKPPYSYIALITMAIQNAPEKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECF 129

  Fly   458 RKGVKAPQ-----GAGHLWAISSGDSAENVLAWEHKKQRLDLFFKMESINRERIQQHQQQQQLQQ 517
               ||.|:     |.|..|.:.. ||..              .|:..|..|.|.:..::.....:
Mouse   130 ---VKVPRDDKKPGKGSYWTLDP-DSYN--------------MFENGSFLRRRRRFKKKDVPKDK 176

  Fly   518 HQQQHQQHSPQQKQHSA------AQQQHMPQASSCMYDEAA-------VAVATLTQE--MMQTNS 567
            .::.|.:..|......|      |......:....:..|||       ..|.||:.|  :..:..
Mouse   177 EERAHLKEPPSTTAKGAPTGTPVADGPKEAEKKVVVKSEAASPALPVITKVETLSPEGALQASPR 241

  Fly   568 GGGSTETSQQQQQQQQHH 585
            ...||..........:||
Mouse   242 SASSTPAGSPDGSLPEHH 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd3FNP_001356931.1 Forkhead 401..473 CDD:459732 36/78 (46%)
Foxc2NP_038547.2 FH_FOXC1 66..158 CDD:410818 41/109 (38%)
COG5025 71..>251 CDD:227358 55/197 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 166..213 4/46 (9%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 233..267 5/27 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 381..422
Blue background indicates that the domain is not in the aligned region.

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