DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd3F and LOC1277808

DIOPT Version :10

Sequence 1:NP_001356931.1 Gene:fd3F / 31336 FlyBaseID:FBgn0264954 Length:764 Species:Drosophila melanogaster
Sequence 2:XP_317309.5 Gene:LOC1277808 / 1277808 VectorBaseID:AGAMI1_008630 Length:664 Species:Anopheles gambiae


Alignment Length:305 Identity:72/305 - (23%)
Similarity:106/305 - (34%) Gaps:124/305 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 PPTSSSAQNASNHTQQSTQQNVSPGQNPHQNQHFLVPQKQRIQSAGRRTSSGSVSGANEATEADF 238
            |..::|...:|.|:||.           |.:.|   |..|.:||                     
Mosquito    24 PTHNASLNESSTHSQQQ-----------HYHDH---PHLQSMQS--------------------- 53

  Fly   239 EDKNLSWLLNFKFDEFPHLSPHNQIHGQAVNLPEGSAPPHPPSTAVPIATSPCSSSSPSSASAAS 303
                             |...|:..|.||   |.|                    ...|.||...
Mosquito    54 -----------------HQGHHHNQHQQA---PSG--------------------QRSSGASRNR 78

  Fly   304 ASASAISTNQSLGSGLVDQRARSPKSCS-SAAMPAALGGGGNGSAGASAAGGVAGVGSTKTGRKF 367
            :.:::.|.|.:..||...|:.:.|.|.: :.|...|..|||.|.:|:               .:.
Mosquito    79 SRSTSSSDNGTPSSGQKPQQQQQPDSDNGTEAGEGATSGGGGGKSGS---------------HRS 128

  Fly   368 EELVMEVTSELDGNDMIVAEHVVVEDTSSKAPKKPPFTYTELIEYAL--EDKGELTVSGIYQWIS 430
            :.||                             |||::|..||..|:  ..:.:||:|||.::|.
Mosquito   129 QSLV-----------------------------KPPYSYIALITMAILQSPQKKLTLSGICEFIM 164

  Fly   431 DRFPYYKSNDDRWKNSVRHNLSINPHFRKGVKAP--QGAGHLWAI 473
            .||||||.....|:||:|||||:|..|.|..:.|  .|.|:.|.:
Mosquito   165 TRFPYYKEKFPAWQNSIRHNLSLNDCFIKIPREPGNPGKGNFWTL 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd3FNP_001356931.1 Forkhead 401..473 CDD:459732 34/75 (45%)
LOC1277808XP_317309.5 None

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